RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 MRPL24Q96A35 216 aaKnown RBP2.05□□□□□ -2.08
CACUL1-202ENST00000477583 C5orf30Q96GV9 206 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 RCHY1Q96PM5 261 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 S1PR3Q99500 378 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 RAB11FIP5Q9BXF6 653 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 MRPL9Q9BYD2 267 aaKnown RBP2.05□□□□□ -2.08
CACUL1-202ENST00000477583 WWP1Q9H0M0 922 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 TSPYL1Q9H0U9 437 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 CXXC4Q9H2H0 198 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 ADNPQ9H2P0 1102 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 LIME1Q9H400 295 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 NMUR1Q9HB89 426 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 MAD2L2Q9UI95 211 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 EXOC6BQ9Y2D4 811 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 CSAG2Q9Y5P2 127 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 AUP1Q9Y679 476 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 STYXL1Q9Y6J8 313 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 PCNX3Q9H6A9 2034 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 AGRNO00468 2067 aa2.05□□□□□ -2.08
CACUL1-202ENST00000477583 SH3PXD2BA1X283 911 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 RPL37AP8A6NKH3 93 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 OGTO15294 1046 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 KIAA0513O60268 411 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 GALR3O60755 368 aaPredicted RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 GMNNO75496 209 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 CSDE1O75534 798 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 ANXA9O76027 345 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 OR6A2O95222 327 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 IGHG1P01857 330 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 COL5A2P05997 1499 aaPredicted RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 FHP07954 510 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 CT45A8P0DMV1 189 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 CT45A9P0DMV2 189 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 CYP3A5P20815 502 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 OAS2P29728 719 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 MTIF2P46199 727 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 GSK3BP49841 420 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 RIDAP52758 137 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 SLC8A3P57103 927 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 KCNK10P57789 538 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 RPL27P61353 136 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 ACY1Q03154 408 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 MSLNQ13421 630 aaPredicted RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 FASTKQ14296 549 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 LASP1Q14847 261 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 SLC17A1Q14916 467 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 HEPACAMQ14CZ8 416 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 OR1C1Q15619 314 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 STX1AQ16623 288 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 CT45A2Q5DJT8 189 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 DCAF12Q5T6F0 453 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 C9orf66Q5T8R8 295 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 ITIH5Q86UX2 942 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 SLC25A42Q86VD7 318 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 C17orf64Q86WR6 236 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 SNX32Q86XE0 403 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 FBXW8Q8N3Y1 598 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 POM121L12Q8N7R1 296 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 C4orf32Q8N8J7 132 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 SIDT2Q8NBJ9 832 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 OR4Q3Q8NH05 313 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 OR2L2Q8NH16 312 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 TCP11Q8WWU5 503 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 SNX21Q969T3 373 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 MRPL53Q96EL3 112 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 CXorf58Q96LI9 332 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 ANKRD27Q96NW4 1050 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 RAB40CQ96S21 281 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 PUS3Q9BZE2 481 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 LRRCC1Q9C099 1032 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 MARCH7Q9H992 704 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 MID1IP1Q9NPA3 183 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 RPS10P5Q9NQ39 176 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 ZCCHC3Q9NUD5 404 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 DDX28Q9NUL7 540 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 TECRQ9NZ01 308 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 TEKT2Q9UIF3 430 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 MRTO4Q9UKD2 239 aaKnown RBP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.04□□□□□ -2.08
CACUL1-202ENST00000477583 SNX5Q9Y5X3 404 aa2.04□□□□□ -2.08
CACUL1-202ENST00000477583 IGHV3-16A0A0C4DH30 117 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 SLC28A1O00337 649 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 TXNL1O43396 289 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 DUSP11O75319 330 aaKnown RBP2.03□□□□□ -2.08
CACUL1-202ENST00000477583 FRAT2O75474 233 aaPredicted RBP2.03□□□□□ -2.08
CACUL1-202ENST00000477583 PRDM1O75626 825 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 SEMA4FO95754 770 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 TXNDC12O95881 172 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 HCKP08631 526 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 TPBGLP0DKB5 382 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 FOLR2P14207 255 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 UGT1A6P19224 532 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 PPP2R1AP30153 589 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 STIP1P31948 543 aaKnown RBP2.03□□□□□ -2.08
CACUL1-202ENST00000477583 SLC1A4P43007 532 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 SLC1A6P48664 564 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 PGFP49763 221 aa2.03□□□□□ -2.08
CACUL1-202ENST00000477583 ZFP36L1Q07352 338 aaKnown RBP2.03□□□□□ -2.08
CACUL1-202ENST00000477583 ACTN3Q08043 901 aaPredicted RBP2.03□□□□□ -2.08
CACUL1-202ENST00000477583 HSPA14Q0VDF9 509 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms