RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 FAM53CQ9NYF3 392 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 FBXL4Q9UKA2 621 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 LOC102723996A0A087X1L8 192 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 IGHV1-45A0A0A0MS14 117 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 SEC24DO94855 1032 aaPredicted RBP14.87□□□□□ -0.03
COPS3-207ENST00000477299 ALDOCP09972 364 aaKnown RBP14.87□□□□□ -0.03
COPS3-207ENST00000477299 ACPPP15309 386 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 BUD31P41223 144 aaPredicted RBP14.87□□□□□ -0.03
COPS3-207ENST00000477299 OR4D2P58180 307 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 PTGR1Q14914 329 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 TBR1Q16650 682 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 ATP6AP1LQ52LC2 224 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 CRTC2Q53ET0 693 aaPredicted RBP14.87□□□□□ -0.03
COPS3-207ENST00000477299 TMEM198Q66K66 360 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 EPGNQ6UW88 154 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 PARP9Q8IXQ6 854 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 LRRC34Q8IZ02 419 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 FNDC5Q8NAU1 212 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 RFWD2Q8NHY2 731 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 SNRNP27Q8WVK2 155 aaKnown RBP14.87□□□□□ -0.03
COPS3-207ENST00000477299 METTL21AQ8WXB1 218 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 EXTL1Q92935 676 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 MARK4Q96L34 752 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 ZNF160Q9HCG1 818 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 FGFR1OP2Q9NVK5 253 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 RIC8BQ9NVN3 520 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 MS4A12Q9NXJ0 267 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 G3BP2Q9UN86 482 aaKnown RBP14.87□□□□□ -0.03
COPS3-207ENST00000477299 MRPS33Q9Y291 106 aaKnown RBP14.87□□□□□ -0.03
COPS3-207ENST00000477299 MMACHCQ9Y4U1 282 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 SPACA6W5XKT8 324 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 CHD6Q8TD26 2715 aa14.87□□□□□ -0.03
COPS3-207ENST00000477299 HRKO00198 91 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 CLDN4O14493 209 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 MYO1DO94832 1006 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 GPR75O95800 540 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 IGHEP01854 428 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 G6PDP11413 515 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 TLX1P31314 330 aaPredicted RBP14.86□□□□□ -0.03
COPS3-207ENST00000477299 FEN1P39748 380 aaKnown RBP14.86□□□□□ -0.03
COPS3-207ENST00000477299 IDH3AP50213 366 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 UCNP55089 124 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 TRA2BP62995 288 aaKnown RBP14.86□□□□□ -0.03
COPS3-207ENST00000477299 IGLV3-21P80748 117 aaPredicted RBP14.86□□□□□ -0.03
COPS3-207ENST00000477299 EMX2Q04743 252 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 ZNF763Q0D2J5 394 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 STX4Q12846 297 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 SLC48A1Q6P1K1 146 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 KRTCAP2Q8N6L1 136 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 ZNF321PQ8N8H1 164 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 ADAMTS18Q8TE60 1221 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 TANKQ92844 425 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 EXOSC8Q96B26 276 aaKnown RBP14.86□□□□□ -0.03
COPS3-207ENST00000477299 MAELQ96JY0 434 aaKnown RBP14.86□□□□□ -0.03
COPS3-207ENST00000477299 IMMP1LQ96LU5 166 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 ZNF700Q9H0M5 742 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 KCNK13Q9HB14 408 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 MYNNQ9NPC7 610 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 VTI1BQ9UEU0 232 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 POLHQ9Y253 713 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 MAN2B2Q9Y2E5 1009 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 KCNMB2Q9Y691 235 aa14.86□□□□□ -0.03
COPS3-207ENST00000477299 CACNA1GO43497 2377 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 C1orf226A1L170 272 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 A6NL46 340 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 POLR3GO15318 223 aaPredicted RBP14.85□□□□□ -0.03
COPS3-207ENST00000477299 DIAPH2O60879 1101 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 ERAL1O75616 437 aaKnown RBP14.85□□□□□ -0.03
COPS3-207ENST00000477299 LBPP18428 481 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 SOX18P35713 384 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 XKP51811 444 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 AQP5P55064 265 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 NME5P56597 212 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 ACTN3Q08043 901 aaPredicted RBP14.85□□□□□ -0.03
COPS3-207ENST00000477299 RAPSNQ13702 412 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 LSM12Q3MHD2 195 aaKnown RBP14.85□□□□□ -0.03
COPS3-207ENST00000477299 LINC00303Q3SY05 128 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 ZNF385BQ569K4 471 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 NXNQ6DKJ4 435 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 OR52E8Q6IFG1 317 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 PAPD4Q6PIY7 484 aaKnown RBP14.85□□□□□ -0.03
COPS3-207ENST00000477299 NDUFAF7Q7L592 441 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 TICAM1Q8IUC6 712 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 TMEM132CQ8N3T6 1108 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 SIMC1Q8NDZ2 872 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 NFAM1Q8NET5 270 aaPredicted RBP14.85□□□□□ -0.03
COPS3-207ENST00000477299 PTPMT1Q8WUK0 201 aaPredicted RBP14.85□□□□□ -0.03
COPS3-207ENST00000477299 CNRIP1Q96F85 164 aaPredicted RBP14.85□□□□□ -0.03
COPS3-207ENST00000477299 METTL2AQ96IZ6 378 aaKnown RBP14.85□□□□□ -0.03
COPS3-207ENST00000477299 ZNF681Q96N22 645 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 ZNF317Q96PQ6 595 aaPredicted RBP14.85□□□□□ -0.03
COPS3-207ENST00000477299 CCT7Q99832 543 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 CCDC134Q9H6E4 229 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 NPHS2Q9NP85 383 aa14.85□□□□□ -0.03
COPS3-207ENST00000477299 TRPC5OSA6NMA1 111 aa14.84□□□□□ -0.03
COPS3-207ENST00000477299 PEX12O00623 359 aa14.84□□□□□ -0.03
COPS3-207ENST00000477299 IFNA16P05015 189 aa14.84□□□□□ -0.03
COPS3-207ENST00000477299 VIMP08670 466 aaKnown RBP14.84□□□□□ -0.03
COPS3-207ENST00000477299 CT62P0C5K7 136 aa14.84□□□□□ -0.03
COPS3-207ENST00000477299 ALOX15P16050 662 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms