RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 PCID2Q5JVF3 399 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PRR31Q5SQ13 230 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PRAMEF19Q5SWL8 479 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PDZK1Q5T2W1 519 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 C20orf194Q5TEA3 1177 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 FAM46CQ5VWP2 391 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 MLIPQ5VWP3 458 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 METRNLQ641Q3 311 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ZSCAN25Q6NSZ9 544 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 UGT3A1Q6NUS8 523 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ARMC6Q6NXE6 501 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 DHRS13Q6UX07 377 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 BTNL8Q6UX41 500 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 TPGS1Q6ZTW0 290 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ERASQ7Z444 233 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 GPR141Q7Z602 305 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ZDHHC17Q8IUH5 632 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 MAPKAPK5Q8IW41 473 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ST13P4Q8IZP2 240 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 SLC7A5P1Q8MH63 180 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 FAM58AQ8N1B3 248 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 SPATA6LQ8N4H0 392 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PARP16Q8N5Y8 322 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 EMC1Q8N766 993 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 TMEM217Q8N7C4 229 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ZNF565Q8N9K5 539 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 SYT14Q8NB59 555 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 COLGALT1Q8NBJ5 622 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PPFIBP2Q8ND30 876 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 MDGA1Q8NFP4 955 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 OR5D13Q8NGL4 314 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 OR13F1Q8NGS4 319 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 OR2AJ1Q8NGZ0 328 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 VANGL1Q8TAA9 524 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 M1APQ8TC57 530 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 RAET1EQ8TD07 263 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 GPX8Q8TED1 209 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PPP4R1Q8TF05 950 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 SPRYD4Q8WW59 207 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 MAIP1Q8WWC4 291 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 DNAAF4Q8WXU2 420 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PIGBQ92521 554 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 SMG7Q92540 1137 aaKnown RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PHYHIPQ92561 330 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 OSTF1Q92882 214 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 HIST1H2ACQ93077 130 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 KIAA1143Q96AT1 154 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 FKBP10Q96AY3 582 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 P2RY11Q96G91 374 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 LMLNQ96KR4 655 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 MARK4Q96L34 752 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ZNF582Q96NG8 517 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 TSSK2Q96PF2 358 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 OR1F2PQ96R84 312 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 TGS1Q96RS0 853 aaKnown RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 SLC29A1Q99808 456 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 LMF2Q9BU23 707 aaKnown RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ANKRD60Q9BZ19 345 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PRRG4Q9BZD6 226 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 GANQ9H2C0 597 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 RANBP3Q9H6Z4 567 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 LRRC19Q9H756 370 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 DCLRE1BQ9H816 532 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 TBC1D17Q9HA65 648 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ZNF160Q9HCG1 818 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PNO1Q9NRX1 252 aaKnown RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ACSS1Q9NUB1 689 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 SMARCAL1Q9NZC9 954 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 KLHL13Q9P2N7 655 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 NARFQ9UHQ1 456 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ZNF490Q9ULM2 529 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 TTC7AQ9ULT0 858 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 RPH3ALQ9UNE2 315 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 SATB2Q9UPW6 733 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PIGLQ9Y2B2 252 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 NOX1Q9Y5S8 564 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 KLF2Q9Y5W3 355 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 NPTNQ9Y639 398 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 WDFY3Q8IZQ1 3526 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ADAMTS20P59510 1910 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 WDR17Q8IZU2 1322 aa2.7□□□□□ -1.98
HMGN4-202ENST00000477243 ATXN2Q99700 1313 aaKnown RBP2.7□□□□□ -1.98
HMGN4-202ENST00000477243 NSD1Q96L73 2696 aaPredicted RBP2.7□□□□□ -1.98
HMGN4-202ENST00000477243 TRGV11A0A075B6L2 103 aa2.7□□□□□ -1.98
HMGN4-202ENST00000477243 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.7□□□□□ -1.98
HMGN4-202ENST00000477243 LRRIQ3A6PVS8 624 aaPredicted RBP2.7□□□□□ -1.98
HMGN4-202ENST00000477243 A8MU76 341 aa2.7□□□□□ -1.98
HMGN4-202ENST00000477243 E9PMD0 336 aa2.7□□□□□ -1.98
HMGN4-202ENST00000477243 J3QR06 171 aa2.7□□□□□ -1.98
HMGN4-202ENST00000477243 SGK494L7N484 410 aa2.7□□□□□ -1.98
HMGN4-202ENST00000477243 CLIC1O00299 241 aa2.7□□□□□ -1.98
HMGN4-202ENST00000477243 ABCD4O14678 606 aa2.7□□□□□ -1.98
HMGN4-202ENST00000477243 RRP8O43159 456 aaKnown RBP2.7□□□□□ -1.98
HMGN4-202ENST00000477243 PLPP2O43688 288 aa2.7□□□□□ -1.98
HMGN4-202ENST00000477243 DFNA5O60443 496 aa2.7□□□□□ -1.98
HMGN4-202ENST00000477243 JAK2O60674 1132 aa2.7□□□□□ -1.98
HMGN4-202ENST00000477243 KCNJ13O60928 360 aa2.7□□□□□ -1.98
HMGN4-202ENST00000477243 CLN5O75503 358 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms