RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 HRKO00198 91 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 AZIN1O14977 448 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 TM9SF1O15321 606 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 PRKNO60260 465 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-208ENST00000476739 DPM1O60762 260 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 CRCPO75575 148 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 IFNA16P05015 189 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 ALPPP05187 535 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 NR2F6P10588 404 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 ICAM2P13598 275 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 BUD31P41223 144 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-208ENST00000476739 WDR4P57081 412 aaKnown RBP9.05□□□□□ -0.96
HDAC3-208ENST00000476739 MAGOHP61326 146 aaKnown RBP9.05□□□□□ -0.96
HDAC3-208ENST00000476739 MFAP5Q13361 173 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 RCN2Q14257 317 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 CHI3L2Q15782 390 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 EXT1Q16394 746 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 ZSCAN26Q16670 478 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 ZNF750Q32MQ0 723 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 UGT3A2Q3SY77 523 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 PLEKHN1Q494U1 663 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-208ENST00000476739 CRB2Q5IJ48 1285 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 NDUFAF5Q5TEU4 345 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 IRAK1BP1Q5VVH5 260 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 SLC6A19Q695T7 634 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 H3F3CQ6NXT2 135 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 JMJD6Q6NYC1 403 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-208ENST00000476739 FAM180BQ6P0A1 224 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 ISLR2Q6UXK2 745 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 Q6ZSR9 355 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 PRICKLE2Q7Z3G6 844 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 TRIM46Q7Z4K8 759 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 CROCCP2Q86T23 111 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 CRLF3Q8IUI8 442 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 NUDCD3Q8IVD9 361 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 GBP7Q8N8V2 638 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-208ENST00000476739 ANKRD42Q8N9B4 389 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 TEX19Q8NA77 164 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 DNAJB14Q8TBM8 379 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 SREK1Q8WXA9 508 aaKnown RBP9.05□□□□□ -0.96
HDAC3-208ENST00000476739 NCLNQ969V3 563 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 EPN3Q9H201 632 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 KCNK13Q9HB14 408 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 ADAP2Q9NPF8 381 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 HEY2Q9UBP5 337 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 ZDHHC2Q9UIJ5 367 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 CES1P1Q9UKY3 287 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 DNAJC15Q9Y5T4 150 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 SPACA6W5XKT8 324 aa9.05□□□□□ -0.96
HDAC3-208ENST00000476739 CNTRLQ7Z7A1 2325 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 TMEM120BA0PK00 339 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 BLACEA4D250 179 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 C17orf105B2RV13 164 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 H3BQF6 201 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 SLC28A2O43868 658 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 PCDH7O60245 1069 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 SORBS2O94875 1100 aaKnown RBP9.04□□□□□ -0.96
HDAC3-208ENST00000476739 ZWINTO95229 277 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 GPR75O95800 540 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 WDPCPO95876 746 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 FGF4P08620 206 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 LINC00032P0C843 101 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 BGNP21810 368 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 TLX1P31314 330 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-208ENST00000476739 TIA1P31483 386 aaKnown RBP eCLIP9.04□□□□□ -0.96
HDAC3-208ENST00000476739 PTGER1P34995 402 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 STT3AP46977 705 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 MAPK12P53778 367 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 MLLT10P55197 1068 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 ZNF33BQ06732 778 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 ASPHQ12797 758 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 KIAA0040Q15053 153 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 ELAVL1Q15717 326 aaKnown RBP9.04□□□□□ -0.96
HDAC3-208ENST00000476739 PRSS53Q2L4Q9 553 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 PRR30Q53SZ7 412 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-208ENST00000476739 TTMPQ5BVD1 217 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 SPDYAQ5MJ70 313 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 SH2D4BQ5SQS7 431 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 C16orf47Q6ZP98 133 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-208ENST00000476739 Q6ZS92 163 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 PAGE2Q7Z2X7 111 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 ZNF605Q86T29 641 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 BEST3Q8N1M1 668 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 B3GNT7Q8NFL0 401 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 MGARPQ8TDB4 240 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 ZNF721Q8TF20 911 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 TANKQ92844 425 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 LMF1Q96S06 567 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 SORT1Q99523 831 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 PAIP2Q9BPZ3 127 aaKnown RBP9.04□□□□□ -0.96
HDAC3-208ENST00000476739 TRMOQ9BU70 441 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 TRIM4Q9C037 500 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 CDCP1Q9H5V8 836 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 LIN28AQ9H9Z2 209 aaKnown RBP9.04□□□□□ -0.96
HDAC3-208ENST00000476739 NMRK1Q9NWW6 199 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 ANKRD10Q9NXR5 420 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 STMN3Q9NZ72 180 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 GIMAP2Q9UG22 337 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 MCM8Q9UJA3 840 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 ANAPC2Q9UJX6 822 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms