RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 SV2CQ496J9 727 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 PTPN20Q4JDL3 420 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 FASTKD1Q53R41 847 aaKnown RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 TRIM61Q5EBN2 209 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 SAMD4BQ5PRF9 694 aaKnown RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 ATPAF1Q5TC12 328 aaPredicted RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 HACD4Q5VWC8 232 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 BSPRYQ5W0U4 402 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 MBLAC2Q68D91 279 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 GLYATQ6IB77 296 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 AFTPHQ6ULP2 937 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 BAIAP2L2Q6UXY1 529 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 CYP2R1Q6VVX0 501 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 CERS6Q6ZMG9 384 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 EIF3MQ7L2H7 374 aaKnown RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 DDX53Q86TM3 631 aaKnown RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 NUDT13Q86X67 352 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 PPP1R3BQ86XI6 285 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 C1orf127Q8N9H9 656 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 NETO2Q8NC67 525 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 GMCL1P1Q8NEA9 526 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 ZNF555Q8NEP9 628 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 OR5T3Q8NGG3 340 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 OR56A3Q8NH54 315 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 NEK7Q8TDX7 302 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 ATG4AQ8WYN0 398 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 HAS1Q92839 578 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 HGDQ93099 445 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 TMBIM1Q969X1 311 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 ELMO3Q96BJ8 720 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 HMCESQ96FZ2 354 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 MED8Q96G25 268 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 AURKBQ96GD4 344 aaPredicted RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 TMEM169Q96HH4 297 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 ERMAPQ96PL5 475 aaPredicted RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 ACOX2Q99424 681 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 TXN2Q99757 166 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 CPPED1Q9BRF8 314 aaPredicted RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 C11orf54Q9H0W9 315 aaPredicted RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 SOX17Q9H6I2 414 aaPredicted RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 CNTD2Q9H8S5 307 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 BCO1Q9HAY6 547 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 ZBTB20Q9HC78 741 aaPredicted RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 DZANK1Q9NVP4 752 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 FAM120CQ9NX05 1096 aaKnown RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 H2AFY2Q9P0M6 372 aaPredicted RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 DHCR7Q9UBM7 475 aaKnown RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 IL19Q9UHD0 177 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 FEM1BQ9UK73 627 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 RNF24Q9Y225 148 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 POLR3KQ9Y2Y1 108 aaPredicted RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 MRPS18CQ9Y3D5 142 aaKnown RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 ATP23Q9Y6H3 246 aa3.97□□□□□ -1.77
CD55-208ENST00000476590 NUP153P49790 1475 aaKnown RBP3.97□□□□□ -1.77
CD55-208ENST00000476590 RGPD1P0DJD0 1748 aa3.96□□□□□ -1.77
CD55-208ENST00000476590 C2orf92A0A1B0GVN3 265 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 TCAF2A6NFQ2 919 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 WTIPA6NIX2 430 aaPredicted RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 DUXAA6NLW8 204 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 IQCF5A8MTL0 148 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 GPR89AB7ZAQ6 455 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 ACKR2O00590 384 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 CYB561D2O14569 222 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 MID1O15344 667 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 ARPC5O15511 151 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 LRRTM2O43300 516 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 CTNSO60931 367 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 VPS26AO75436 327 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SGPL1O95470 568 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 HPRP00739 348 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 CSTAP01040 98 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 IFNB1P01574 187 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 GPIP06744 558 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 HEXAP06865 529 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SNRNP70P08621 437 aaKnown RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 OR52Z1P0C646 297 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 GPR89BP0CG08 455 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 TXNP10599 105 aaKnown RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 THRBP10828 461 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 ANXA3P12429 323 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 RHOQP17081 205 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 IL11P20809 199 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 CD72P21854 359 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 GIFP27352 417 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SSTR1P30872 391 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 S100A11P31949 105 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 TNFSF8P32971 234 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 THBS4P35443 961 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 TGFBR1P36897 503 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 NRIP1P48552 1158 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 RGS6P49758 472 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 CYP2J2P51589 502 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 VAMP2P63027 116 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SLC7A9P82251 487 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 EGR3Q06889 387 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SLC10A2Q12908 348 aaPredicted RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 MADCAM1Q13477 382 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 ARHGEF7Q14155 803 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 HIF1AQ16665 826 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 MEP1AQ16819 746 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms