RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 CPN2P22792 545 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 RRADP55042 308 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 EMX2Q04743 252 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 SF3A3Q12874 501 aaKnown RBP eCLIP13.5□□□□□ -0.257e-12■■■■■ 32.5
CCNL1-217ENST00000476367 SLC13A2Q13183 592 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 NSDHLQ15738 373 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 LINC00303Q3SY05 128 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 DCAF10Q5QP82 559 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 CCNYL2Q5T2Q4 361 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 FAM71E1Q6IPT2 247 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 QSOX2Q6ZRP7 698 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 PAGE2Q7Z2X7 111 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 TMEM102Q8N9M5 508 aaPredicted RBP13.5□□□□□ -0.25
CCNL1-217ENST00000476367 CLEC1AQ8NC01 280 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 ACTRT2Q8TDY3 377 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 NACC2Q96BF6 587 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 CHMP6Q96FZ7 201 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 PPP3R2Q96LZ3 170 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 FER1L6-AS2Q96M78 137 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 PRTFDC1Q9NRG1 225 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 PHF11Q9UIL8 331 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 DCTN4Q9UJW0 460 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 IGKV3D-11A0A0A0MRZ8 115 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 GLOD5A6NK44 160 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 TRPC5OSA6NMA1 111 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 ERVH48-1M5A8F1 160 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 SHOX2O60902 331 aaPredicted RBP13.5□□□□□ -0.25
CCNL1-217ENST00000476367 SEC24DO94855 1032 aaPredicted RBP13.5□□□□□ -0.25
CCNL1-217ENST00000476367 CYC1P08574 325 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 ANXA4P09525 319 aaPredicted RBP13.5□□□□□ -0.25
CCNL1-217ENST00000476367 COX6A1P12074 109 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 CD1EP15812 388 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 MAPK12P53778 367 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 TAS2R50P59544 299 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 GNGT1P63211 74 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 TNFRSF17Q02223 184 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 RAPSNQ13702 412 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 PTGR1Q14914 329 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 ATP6AP1LQ52LC2 224 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 NDUFAF5Q5TEU4 345 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 TMEM205Q6UW68 189 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 ANKRD37Q7Z713 158 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 SCUBE1Q8IWY4 988 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 HOMEZQ8IX15 550 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 DNAJB14Q8TBM8 379 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 ANKRD9Q96BM1 317 aaPredicted RBP13.5□□□□□ -0.25
CCNL1-217ENST00000476367 VPS50Q96JG6 964 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 TEX37Q96LM6 180 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 ZNF160Q9HCG1 818 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 NECTIN3Q9NQS3 549 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 PRDM9Q9NQV7 894 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 RIC8BQ9NVN3 520 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 LYARQ9NX58 379 aaKnown RBP13.5□□□□□ -0.25
CCNL1-217ENST00000476367 ASIC5Q9NY37 505 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 C5AR2Q9P296 337 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 C19orf25Q9UFG5 118 aaPredicted RBP13.5□□□□□ -0.25
CCNL1-217ENST00000476367 RALYQ9UKM9 306 aaKnown RBP13.5□□□□□ -0.25
CCNL1-217ENST00000476367 TMED5Q9Y3A6 229 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 BSNQ9UPA5 3926 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 IGHV1-45A0A0A0MS14 117 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 NSG1A0A0A6YYJ2 146 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 MYOCOSA0A1B0GUC4 107 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 A6NL46 340 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 CLDN4O14493 209 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 DIAPH2O60879 1101 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 LDB3O75112 727 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 IL3P08700 152 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 NR2F6P10588 404 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 G6PDP11413 515 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 SOX18P35713 384 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 CCL11P51671 97 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 ERVK-8P63133 956 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 ID2Q02363 134 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 ZNF763Q0D2J5 394 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 LY6DQ14210 128 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 PCOLCEQ15113 449 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 SMU1Q2TAY7 513 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 SFT2D3Q587I9 215 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 IL23RQ5VWK5 629 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 FAM180BQ6P0A1 224 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 CPEB2Q7Z5Q1 589 aaKnown RBP13.49□□□□□ -0.25
CCNL1-217ENST00000476367 APLFQ8IW19 511 aaPredicted RBP13.49□□□□□ -0.25
CCNL1-217ENST00000476367 RIMKLAQ8IXN7 391 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 PARP9Q8IXQ6 854 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 ZNF595Q8IYB9 648 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 LIX1Q8N485 282 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 FNDC5Q8NAU1 212 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 PLPP5Q8NEB5 264 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 CLHC1Q8NHS4 586 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 STON2Q8WXE9 905 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 TSSK3Q96PN8 268 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 MYNNQ9NPC7 610 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 MMACHCQ9Y4U1 282 aa13.49□□□□□ -0.25
CCNL1-217ENST00000476367 PIEZO2Q9H5I5 2752 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 LOC102723996A0A087X1L8 192 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 PCDH17O14917 1159 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 FGF17O60258 216 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 HPP00738 406 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 LBPP18428 481 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 BUD31P41223 144 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms