RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 NDRG3Q9UGV2 375 aa18.54■□□□□ 0.56
HDAC11-217ENST00000475818 CHCHD2Q9Y6H1 151 aaPredicted RBP18.54■□□□□ 0.56
HDAC11-217ENST00000475818 LDB3O75112 727 aa18.53■□□□□ 0.56
HDAC11-217ENST00000475818 LIM2P55344 173 aa18.53■□□□□ 0.56
HDAC11-217ENST00000475818 VASNQ6EMK4 673 aa18.53■□□□□ 0.56
HDAC11-217ENST00000475818 SYDE1Q6ZW31 735 aaPredicted RBP18.53■□□□□ 0.56
HDAC11-217ENST00000475818 C9orf40Q8IXQ3 194 aa18.53■□□□□ 0.56
HDAC11-217ENST00000475818 SYCE1Q8N0S2 351 aa18.53■□□□□ 0.56
HDAC11-217ENST00000475818 WDYHV1Q96HA8 205 aa18.53■□□□□ 0.56
HDAC11-217ENST00000475818 HES6Q96HZ4 224 aa18.53■□□□□ 0.56
HDAC11-217ENST00000475818 ZNF597Q96LX8 424 aa18.53■□□□□ 0.56
HDAC11-217ENST00000475818 C20orf96Q9NUD7 363 aaPredicted RBP18.53■□□□□ 0.56
HDAC11-217ENST00000475818 CNIH4Q9P003 139 aa18.53■□□□□ 0.56
HDAC11-217ENST00000475818 FBXO5Q9UKT4 447 aa18.53■□□□□ 0.56
HDAC11-217ENST00000475818 CNOT11Q9UKZ1 510 aaKnown RBP18.53■□□□□ 0.56
HDAC11-217ENST00000475818 SYNDIG1LA6NDD5 238 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 DEFB108AA8MXU0 73 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 IPO7O95373 1038 aaKnown RBP18.52■□□□□ 0.56
HDAC11-217ENST00000475818 IFNA2P01563 188 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 C1QAP02745 245 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 TPSB2P20231 275 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 CPOXP36551 454 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 NR1H2P55055 460 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 DMTNQ08495 405 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 TBL3Q12788 808 aaKnown RBP18.52■□□□□ 0.56
HDAC11-217ENST00000475818 TPSAB1Q15661 275 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 GSTA5Q7RTV2 222 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 THOC6Q86W42 341 aaKnown RBP18.52■□□□□ 0.56
HDAC11-217ENST00000475818 MAPK1IP1LQ8NDC0 245 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 ATL1Q8WXF7 558 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 PIGQQ9BRB3 760 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 UGT2B28Q9BY64 529 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 GSX2Q9BZM3 304 aa18.52■□□□□ 0.56
HDAC11-217ENST00000475818 A0A088AWK7 358 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 ZCWPW2A0A1B0GU75 182 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 LRIT2A6NDA9 550 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 CTIFO43310 598 aaKnown RBP18.51■□□□□ 0.55
HDAC11-217ENST00000475818 ZNF10P21506 573 aaPredicted RBP18.51■□□□□ 0.55
HDAC11-217ENST00000475818 SOX18P35713 384 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 SLCO1A2P46721 670 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 CDK9P50750 372 aaKnown RBP18.51■□□□□ 0.55
HDAC11-217ENST00000475818 AP1S2P56377 157 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 TOMM20Q15388 145 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 EIPR1Q53HC9 387 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 PLXDC2Q6UX71 529 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 NUBPLQ8TB37 319 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 DOK4Q8TEW6 326 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 SLC44A1Q8WWI5 657 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 SFXN3Q9BWM7 321 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 TRIM54Q9BYV2 358 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 CALHM2Q9HA72 323 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 KLHL28Q9NXS3 571 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 TAS2R13Q9NYV9 303 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 DAPP1Q9UN19 280 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 SLC22A14Q9Y267 594 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 MAD1L1Q9Y6D9 718 aa18.51■□□□□ 0.55
HDAC11-217ENST00000475818 SNPHO15079 494 aa18.5■□□□□ 0.55
HDAC11-217ENST00000475818 TRIM3O75382 744 aaPredicted RBP18.5■□□□□ 0.55
HDAC11-217ENST00000475818 MSH2P43246 934 aa18.5■□□□□ 0.55
HDAC11-217ENST00000475818 PGGT1BP53609 377 aa18.5■□□□□ 0.55
HDAC11-217ENST00000475818 CDKN2DP55273 166 aa18.5■□□□□ 0.55
HDAC11-217ENST00000475818 CDK16Q00536 496 aa18.5■□□□□ 0.55
HDAC11-217ENST00000475818 RCAN2Q14206 197 aa18.5■□□□□ 0.55
HDAC11-217ENST00000475818 EFTUD2Q15029 972 aaKnown RBP eCLIP18.5■□□□□ 0.552e-6■■■□□ 14.8
HDAC11-217ENST00000475818 RBM20Q5T481 1227 aaKnown RBP18.5■□□□□ 0.55
HDAC11-217ENST00000475818 C10orf62Q5T681 223 aaPredicted RBP18.5■□□□□ 0.55
HDAC11-217ENST00000475818 BICRALQ6AI39 1079 aa18.5■□□□□ 0.55
HDAC11-217ENST00000475818 C4orf22Q6V702 233 aa18.5■□□□□ 0.55
HDAC11-217ENST00000475818 C20orf204Q6ZNR8 217 aa18.5■□□□□ 0.55
HDAC11-217ENST00000475818 INTS12Q96CB8 462 aaKnown RBP18.5■□□□□ 0.55
HDAC11-217ENST00000475818 WFIKKN1Q96NZ8 548 aa18.5■□□□□ 0.55
HDAC11-217ENST00000475818 GAL3ST4Q96RP7 486 aa18.5■□□□□ 0.55
HDAC11-217ENST00000475818 SERINC2Q96SA4 455 aa18.5■□□□□ 0.55
HDAC11-217ENST00000475818 COPS7BQ9H9Q2 264 aaPredicted RBP18.5■□□□□ 0.55
HDAC11-217ENST00000475818 CUBNO60494 3623 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 HRKO00198 91 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 HPNP05981 417 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 FBXO45P0C2W1 286 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 SERPINB3P29508 390 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 MTTPP55157 894 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 TNK1Q13470 666 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 SERTAD2Q14140 314 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 RCN2Q14257 317 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 TRIP13Q15645 432 aaPredicted RBP18.49■□□□□ 0.55
HDAC11-217ENST00000475818 WIPI1Q5MNZ9 446 aaPredicted RBP18.49■□□□□ 0.55
HDAC11-217ENST00000475818 TRIM40Q6P9F5 258 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 KIAA1328Q86T90 577 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 CAND1Q86VP6 1230 aaKnown RBP18.49■□□□□ 0.55
HDAC11-217ENST00000475818 GCNT2Q8N0V5 402 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 ZNF441Q8N8Z8 693 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 DIO2Q92813 273 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 ABTB1Q969K4 478 aaPredicted RBP18.49■□□□□ 0.55
HDAC11-217ENST00000475818 SENP5Q96HI0 755 aaPredicted RBP18.49■□□□□ 0.55
HDAC11-217ENST00000475818 HS3ST6Q96QI5 342 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 IARS2Q9NSE4 1012 aaKnown RBP18.49■□□□□ 0.55
HDAC11-217ENST00000475818 WIF1Q9Y5W5 379 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 KCNE2Q9Y6J6 123 aa18.49■□□□□ 0.55
HDAC11-217ENST00000475818 CYP4B1P13584 511 aa18.48■□□□□ 0.55
HDAC11-217ENST00000475818 VPS41P49754 854 aa18.48■□□□□ 0.55
HDAC11-217ENST00000475818 SLBPQ14493 270 aaKnown RBP eCLIP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms