RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MROH9Q5TGP6 573 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 FAM219BQ5XKK7 198 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 MRM1Q6IN84 353 aaKnown RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 MED27Q6P2C8 311 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 ARHGAP11AQ6P4F7 1023 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 TRILQ7L0X0 811 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 LRRC70Q7Z2Q7 622 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 MAATS1Q7Z4T9 603 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 LIX1LQ8IVB5 337 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 C9orf40Q8IXQ3 194 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 GPALPP1Q8IXQ4 340 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 PLD6Q8N2A8 252 aaKnown RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 TMEM251Q8N6I4 163 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 OR5M9Q8NGP3 310 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 OR14A16Q8NHC5 309 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 CA5BP1Q8WTZ4 195 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 KCTD4Q8WVF5 259 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 ASB15Q8WXK1 588 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 C14orf79Q96F83 325 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 MTERF1Q99551 399 aaKnown RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 CCDC77Q9BR77 488 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 CNPPD1Q9BV87 410 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 NMRAL1Q9HBL8 299 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 ZDHHC18Q9NUE0 388 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 HPF1Q9NWY4 346 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 TUBA8Q9NY65 449 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 NUDT4Q9NZJ9 180 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 TXNDC16Q9P2K2 825 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 ERVK-11Q9UQG0 969 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 RNF6Q9Y252 685 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 MRPS33Q9Y291 106 aaKnown RBP6.49□□□□□ -1.37
HDAC3-207ENST00000475549 ACOT9Q9Y305 439 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 TSC22D4Q9Y3Q8 395 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 ASB4Q9Y574 426 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 FAM215AQ9Y5M1 114 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 SCN2AQ99250 2005 aa6.49□□□□□ -1.37
HDAC3-207ENST00000475549 ANKRD17O75179 2603 aaKnown RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 A0A0A6YYD5 115 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 A0A1B0GTL3 188 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 ATP6AP2A0A1C7CYW4 349 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 GLOD5A6NK44 160 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 SUPT3HB4E1H0 165 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 NPIPA2E9PIF3 369 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 NPIPA3F8WFD2 350 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 H0YIV9 168 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 GPR37O15354 613 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 SUPT3HO75486 399 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 ATP6AP2O75787 350 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 SIX3O95343 332 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 ALDOAP04075 364 aaKnown RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 GLI4P10075 376 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 EPB42P16452 691 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 CPN2P22792 545 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 CRABP2P29373 138 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 HPDP32754 393 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 ADH7P40394 386 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 PIK3CBP42338 1070 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 STT3AP46977 705 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 NUP107P57740 925 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 RPS13P62277 151 aaKnown RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 FOLH1Q04609 750 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 TGM3Q08188 693 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 SERTAD2Q14140 314 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 SLMAPQ14BN4 828 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 SETDB1Q15047 1291 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 HIST2H2ACQ16777 129 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 PFKFB4Q16877 469 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 HIST2H2AA3Q6FI13 130 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 GRHL2Q6ISB3 625 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 TMEM64Q6YI46 380 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 MEX3BQ6ZN04 569 aaKnown RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 RTL4Q6ZR62 310 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 RGS9BPQ6ZS82 235 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 RAPH1Q70E73 1250 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 CHSY3Q70JA7 882 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 ZNF572Q7Z3I7 529 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 GPR180Q86V85 440 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 CCDC25Q86WR0 208 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 ZCCHC7Q8N3Z6 543 aaKnown RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 TEX9Q8N6V9 391 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 GOLM1Q8NBJ4 401 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 SRFBP1Q8NEF9 429 aaKnown RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 RHEBL1Q8TAI7 183 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 NUBPLQ8TB37 319 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 WDR20Q8TBZ3 569 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 TANKQ92844 425 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 MRRFQ96E11 262 aaKnown RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 CMTM7Q96FZ5 175 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 RBM18Q96H35 190 aaKnown RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 SGCZQ96LD1 299 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 CDK15Q96Q40 435 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 FAM173AQ9BQD7 235 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 TTYH2Q9BSA4 534 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 PHACTR1Q9C0D0 580 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 ROGDIQ9GZN7 287 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 TP63Q9H3D4 680 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 RPF2Q9H7B2 306 aaKnown RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 COPS7BQ9H9Q2 264 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-207ENST00000475549 IL1RL2Q9HB29 575 aa6.48□□□□□ -1.37
HDAC3-207ENST00000475549 DMRT3Q9NQL9 472 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms