RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 RASAL1O95294 804 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 HOXB6P17509 224 aaKnown RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 PXNP49023 591 aaPredicted RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 SELPLGQ14242 412 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 ZNF630Q2M218 657 aaPredicted RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 LIPKQ5VXJ0 399 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 RSPO2Q6UXX9 243 aaPredicted RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 RPTNQ6XPR3 784 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 C6orf120Q7Z4R8 191 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 DCP2Q8IU60 420 aaKnown RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 LILRA3Q8N6C8 439 aaPredicted RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 WFDC5Q8TCV5 224 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 PROKR1Q8TCW9 393 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 LKAAEAR1Q8TD35 194 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 ZFP90Q8TF47 636 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 UFD1Q92890 307 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 NEIL2Q969S2 332 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 CIDECQ96AQ7 238 aaPredicted RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 MCHR1Q99705 422 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 FUNDC2Q9BWH2 189 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 ITPAQ9BY32 194 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 FAM118AQ9NWS6 357 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 STOX2Q9P2F5 926 aaPredicted RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 RNF6Q9Y252 685 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 PLCH1Q4KWH8 1693 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 HHLA1C9JL84 531 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 J3QLW9 94 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 SMAD9O15198 467 aaKnown RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 TPPPO94811 219 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 KLF8O95600 359 aaPredicted RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 ZNF19P17023 458 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 SDC1P18827 310 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 SDC2P34741 201 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 CPOXP36551 454 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 GNALP38405 381 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 GRK6P43250 576 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 STARP49675 285 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 PSMD4P55036 377 aaKnown RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 VSX2P58304 361 aaPredicted RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 E2F2Q14209 437 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 RPS26P11Q5JNZ5 115 aaPredicted RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 PRPF38BQ5VTL8 546 aaKnown RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 MLIPQ5VWP3 458 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 LIPJQ5W064 366 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 DESI1Q6ICB0 168 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 SHQ1Q6PI26 577 aaKnown RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 TMEM107Q6UX40 140 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 WDR53Q7Z5U6 358 aaPredicted RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 OAFQ86UD1 273 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 CADM3Q8N126 398 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 LILRA2Q8N149 483 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 TRAM1L1Q8N609 369 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 CHST4Q8NCG5 386 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 TSTD1Q8NFU3 115 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 OR9Q2Q8NGE9 314 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 BCL2L14Q9BZR8 327 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 EXO5Q9H790 373 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 ARNT2Q9HBZ2 717 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 CHMP1AQ9HD42 196 aaPredicted RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 NLGN3Q9NZ94 848 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 CDH7Q9ULB5 785 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 MED31Q9Y3C7 131 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 PCDHB11Q9Y5F2 797 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 SHROOM3Q8TF72 1996 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 A0A1B0GVT2 93 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 DUXAA6NLW8 204 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 HIDE1A8MVS5 230 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 UBFD1O14562 309 aaKnown RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 MPZL2O60487 215 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 PRAMEF12O95522 483 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 DBIP07108 87 aaKnown RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 RPS17P08708 135 aaKnown RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 HSD17B1P14061 328 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 IGFALSP35858 605 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 MAGEA3P43357 314 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 NPRL3Q12980 569 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 ITPRIPL2Q3MIP1 535 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 ATG9BQ674R7 924 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 FIGNL1Q6PIW4 674 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 CEP68Q76N32 757 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 GRAMD2AQ8IUY3 354 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 SLC39A11Q8N1S5 342 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 MEIOBQ8N635 442 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 THAP3Q8WTV1 239 aaPredicted RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 TSPEARQ8WU66 669 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 NT5C3BQ969T7 300 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 GSDMCQ9BYG8 508 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 ACPTQ9BZG2 426 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 ANKRA2Q9H9E1 313 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 NEUROD4Q9HD90 331 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 POLMQ9NP87 494 aaPredicted RBP9.22□□□□□ -0.93
CDH23-211ENST00000475158 SCN1AP35498 2009 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 ANKRD36CQ5JPF3 1778 aa9.22□□□□□ -0.93
CDH23-211ENST00000475158 ARHGEF15O94989 841 aa9.21□□□□□ -0.93
CDH23-211ENST00000475158 CLCN7P51798 805 aa9.21□□□□□ -0.93
CDH23-211ENST00000475158 CCDC58Q4VC31 144 aa9.21□□□□□ -0.93
CDH23-211ENST00000475158 IRAK1BP1Q5VVH5 260 aa9.21□□□□□ -0.93
CDH23-211ENST00000475158 LCN8Q6JVE9 175 aa9.21□□□□□ -0.93
CDH23-211ENST00000475158 STX12Q86Y82 276 aa9.21□□□□□ -0.93
CDH23-211ENST00000475158 TCEAL8Q8IYN2 117 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms