RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SCMH1Q96GD3 660 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 FRMD6Q96NE9 622 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 KCNC2Q96PR1 638 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 SMC6Q96SB8 1091 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 MTERF1Q99551 399 aaKnown RBP14.12□□□□□ -0.15
VARS-223ENST00000474643 SH3GL2Q99962 352 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 MS4A8Q9BY19 250 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 ROGDIQ9GZN7 287 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 CENPHQ9H3R5 247 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 CHST11Q9NPF2 352 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 NECTIN3Q9NQS3 549 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 MID2Q9UJV3 735 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 TINAGQ9UJW2 476 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 ERVK-11Q9UQG0 969 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 CLCA3PQ9Y6N3 262 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 C4orf51C9J302 202 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 H0YIV9 168 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 SAP18O00422 153 aaKnown RBP14.11□□□□□ -0.15
VARS-223ENST00000474643 PRRG2O14669 202 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 NME2P1O60361 137 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 NEURL1O76050 574 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 SMIM10L1P0DMW3 83 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 TNNI3P19429 210 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 IMPDH1P20839 514 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 NME2P22392 152 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 PIK3CBP42338 1070 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 SSR2P43308 183 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 HSD17B7P56937 341 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 MLF1P58340 268 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 CLCQ05315 142 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 SLC18A2Q05940 514 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 ART3Q13508 389 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 TERF2Q15554 542 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 C3AR1Q16581 482 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 CFAP157Q5JU67 520 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 ZNF678Q5SXM1 525 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 ABHD17CQ6PCB6 329 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 CLNKQ7Z7G1 428 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 ZNF595Q8IYB9 648 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 CPSF7Q8N684 471 aaKnown RBP14.11□□□□□ -0.15
VARS-223ENST00000474643 L3MBTL4Q8NA19 623 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 OR4F6Q8NGB9 312 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 ZNF483Q8TF39 744 aaPredicted RBP14.11□□□□□ -0.15
VARS-223ENST00000474643 SMIM10Q96HG1 83 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 TMEM237Q96Q45 408 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 SERINC2Q96SA4 455 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 NPAS2Q99743 824 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 NTMT1Q9BV86 223 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 AICDAQ9GZX7 198 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 OR51B5Q9H339 312 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 ELOVL6Q9H5J4 265 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 ZBTB26Q9HCK0 441 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 DMRT3Q9NQL9 472 aa14.11□□□□□ -0.15
VARS-223ENST00000474643 MYO9AB2RTY4 2548 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 KLRC4-KLRK1H3BQV0 150 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 ASNA1O43681 348 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 CDC40O60508 579 aaKnown RBP eCLIP14.1□□□□□ -0.15
VARS-223ENST00000474643 PLIN3O60664 434 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 SPAG7O75391 227 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 ITGA10O75578 1167 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 PROCP04070 461 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 COX6B1P14854 86 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 CPA3P15088 417 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 PTX3P26022 381 aaPredicted RBP14.1□□□□□ -0.15
VARS-223ENST00000474643 CERS1P27544 350 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 HTR1EP28566 365 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 SSR4P51571 173 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 NEK2P51955 445 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 PRKAA2P54646 552 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 RPS13P62277 151 aaKnown RBP14.1□□□□□ -0.15
VARS-223ENST00000474643 ADPRMQ3LIE5 342 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 UNC50Q53HI1 259 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 SGO1Q5FBB7 561 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 AGBL2Q5U5Z8 902 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 KHDRBS2Q5VWX1 349 aaKnown RBP14.1□□□□□ -0.15
VARS-223ENST00000474643 XKRXQ6PP77 449 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 ZYG11AQ6WRX3 759 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 SPPL2CQ8IUH8 684 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 TMEM132CQ8N3T6 1108 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 RNF175Q8N4F7 328 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 POGLUT1Q8NBL1 392 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 RDH11Q8TC12 318 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 ITLN2Q8WWU7 325 aaPredicted RBP14.1□□□□□ -0.15
VARS-223ENST00000474643 ASB15Q8WXK1 588 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 NCLNQ969V3 563 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 RGMAQ96B86 450 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 APOPT1Q96IL0 206 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 TBCDQ9BTW9 1192 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 TMBIM4Q9HC24 238 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 ADAP2Q9NPF8 381 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 TIMMDC1Q9NPL8 285 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 ZNF446Q9NWS9 450 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 EMCNQ9ULC0 261 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 SNX6Q9UNH7 406 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 STK38LQ9Y2H1 464 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 KLF2Q9Y5W3 355 aaPredicted RBP14.1□□□□□ -0.15
VARS-223ENST00000474643 CELSR2Q9HCU4 2923 aa14.1□□□□□ -0.15
VARS-223ENST00000474643 IGKV3D-11A0A0A0MRZ8 115 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 ASPDHA6ND91 283 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 A8MVJ9 347 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms