RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 DNAJB14Q8TBM8 379 aa16.99■□□□□ 0.31
SNRPB-203ENST00000474384 APOBEC4Q8WW27 367 aaKnown RBP16.99■□□□□ 0.31
SNRPB-203ENST00000474384 WDR77Q9BQA1 342 aaPredicted RBP16.99■□□□□ 0.31
SNRPB-203ENST00000474384 FAIM2Q9BWQ8 316 aa16.99■□□□□ 0.31
SNRPB-203ENST00000474384 TRIM55Q9BYV6 548 aa16.99■□□□□ 0.31
SNRPB-203ENST00000474384 ING2Q9H160 280 aa16.99■□□□□ 0.31
SNRPB-203ENST00000474384 MEAF6Q9HAF1 191 aa16.99■□□□□ 0.31
SNRPB-203ENST00000474384 PNO1Q9NRX1 252 aaKnown RBP16.99■□□□□ 0.31
SNRPB-203ENST00000474384 C5AR2Q9P296 337 aa16.99■□□□□ 0.31
SNRPB-203ENST00000474384 TMED5Q9Y3A6 229 aa16.99■□□□□ 0.31
SNRPB-203ENST00000474384 ATMQ13315 3056 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 TRPC5OSA6NMA1 111 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 SDHDO14521 159 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 DNAJB5O75953 348 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 GPR75O95800 540 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 IFNA16P05015 189 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 ITGB2P05107 769 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 IGLV3-21P80748 117 aaPredicted RBP16.98■□□□□ 0.31
SNRPB-203ENST00000474384 GUCY1A3Q02108 690 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 SLC48A1Q6P1K1 146 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 RGS9BPQ6ZS82 235 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 PARP9Q8IXQ6 854 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 TMEM132CQ8N3T6 1108 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 FNDC5Q8NAU1 212 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.98■□□□□ 0.311e-6■■■■■ 28.3
SNRPB-203ENST00000474384 EGLN2Q96KS0 407 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 C1orf50Q9BV19 199 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 MYNNQ9NPC7 610 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 ATP13A2Q9NQ11 1180 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 BAIAP2L1Q9UHR4 511 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 CES1P1Q9UKY3 287 aa16.98■□□□□ 0.31
SNRPB-203ENST00000474384 KMT2BQ9UMN6 2715 aaPredicted RBP16.97■□□□□ 0.31
SNRPB-203ENST00000474384 TCP11X1B4DZS4 312 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 ZNF195O14628 629 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 BCKDHAP12694 445 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 DRD2P14416 443 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 SDC1P18827 310 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 PIK3R1P27986 724 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 MAPK1P28482 360 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 GSTM5P46439 218 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 CCL11P51671 97 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 Q0VFX4 171 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 SERTAD2Q14140 314 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 HEPACAMQ14CZ8 416 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 IL23RQ5VWK5 629 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 FAM71E1Q6IPT2 247 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 PAPD4Q6PIY7 484 aaKnown RBP16.97■□□□□ 0.31
SNRPB-203ENST00000474384 MAVSQ7Z434 540 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 APLFQ8IW19 511 aaPredicted RBP16.97■□□□□ 0.31
SNRPB-203ENST00000474384 CLEC1AQ8NC01 280 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 OR4K14Q8NGD5 310 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 PPWD1Q96BP3 646 aaKnown RBP16.97■□□□□ 0.31
SNRPB-203ENST00000474384 IMMP1LQ96LU5 166 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 TSSK3Q96PN8 268 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 LPAR4Q99677 370 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 TUBB6Q9BUF5 446 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 WDR55Q9H6Y2 383 aaPredicted RBP16.97■□□□□ 0.31
SNRPB-203ENST00000474384 WBP11Q9Y2W2 641 aaKnown RBP16.97■□□□□ 0.31
SNRPB-203ENST00000474384 USH1CQ9Y6N9 552 aa16.97■□□□□ 0.31
SNRPB-203ENST00000474384 GOLGA8QA0A0J9YX86 632 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 A0A1W2PS29 197 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 GOLGA8OA6NCC3 632 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 A6NL46 340 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 GOLGA8NF8WBI6 632 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 VPS4BO75351 444 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 ERAL1O75616 437 aaKnown RBP16.96■□□□□ 0.31
SNRPB-203ENST00000474384 CELA2AP08217 269 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 PRR35P0CG20 571 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 TNNI3P19429 210 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 XKP51811 444 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 EMX2Q04743 252 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 AIMP2Q13155 320 aaKnown RBP16.96■□□□□ 0.31
SNRPB-203ENST00000474384 ZNF750Q32MQ0 723 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 LINC00303Q3SY05 128 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 SLC9B1Q4ZJI4 515 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 FAM180BQ6P0A1 224 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 LARP4Q71RC2 724 aaKnown RBP eCLIP16.96■□□□□ 0.311e-15■■■■□ 23.3
SNRPB-203ENST00000474384 LIX1Q8N485 282 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 CLHC1Q8NHS4 586 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 GFM2Q969S9 779 aaKnown RBP16.96■□□□□ 0.31
SNRPB-203ENST00000474384 PSME2Q9UL46 239 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 EXO1Q9UQ84 846 aaKnown RBP16.96■□□□□ 0.31
SNRPB-203ENST00000474384 EIF3LQ9Y262 564 aaKnown RBP16.96■□□□□ 0.31
SNRPB-203ENST00000474384 MED13Q9UHV7 2174 aa16.96■□□□□ 0.31
SNRPB-203ENST00000474384 CACNA1BQ00975 2339 aa16.96■□□□□ 0.3
SNRPB-203ENST00000474384 AKAP10O43572 662 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 LRATO95237 230 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 ALOX15P16050 662 aaPredicted RBP16.95■□□□□ 0.3
SNRPB-203ENST00000474384 LBPP18428 481 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 DDCP20711 480 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 EPHA3P29320 983 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 MDH1P40925 334 aaKnown RBP16.95■□□□□ 0.3
SNRPB-203ENST00000474384 STT3AP46977 705 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 RHDQ02161 417 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 MAD2L1Q13257 205 aaPredicted RBP16.95■□□□□ 0.3
SNRPB-203ENST00000474384 BIKQ13323 160 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 ELAVL1Q15717 326 aaKnown RBP16.95■□□□□ 0.3
SNRPB-203ENST00000474384 SMU1Q2TAY7 513 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 BTBD16Q32M84 506 aa16.95■□□□□ 0.3
SNRPB-203ENST00000474384 DGAT2L6Q6ZPD8 337 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms