RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 GGTA1PQ4G0N0 100 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 KRTCAP3Q53RY4 240 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 SGO1Q5FBB7 561 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 C16orf47Q6ZP98 133 aaPredicted RBP10.4□□□□□ -0.74
CKS1B-206ENST00000474215 NUDT13Q86X67 352 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 GSPT2Q8IYD1 628 aaKnown RBP10.4□□□□□ -0.74
CKS1B-206ENST00000474215 ZNF321PQ8N8H1 164 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 MYRIPQ8NFW9 859 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 OR8K3Q8NH51 312 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 SLC2A12Q8TD20 617 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.4□□□□□ -0.74
CKS1B-206ENST00000474215 RELTQ969Z4 430 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 PPWD1Q96BP3 646 aaKnown RBP10.4□□□□□ -0.74
CKS1B-206ENST00000474215 SENP5Q96HI0 755 aaPredicted RBP10.4□□□□□ -0.74
CKS1B-206ENST00000474215 DGAT2Q96PD7 388 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 ERVK-6Q9BXR3 956 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 ELOVL6Q9H5J4 265 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 LIN28AQ9H9Z2 209 aaKnown RBP10.4□□□□□ -0.74
CKS1B-206ENST00000474215 WDR41Q9HAD4 459 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 AHSPQ9NZD4 102 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 MYOTQ9UBF9 498 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 TBK1Q9UHD2 729 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 DCDC2Q9UHG0 476 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 SNX6Q9UNH7 406 aa10.4□□□□□ -0.74
CKS1B-206ENST00000474215 DOPEY2Q9Y3R5 2298 aa10.4□□□□□ -0.75
CKS1B-206ENST00000474215 A0A1B0GTL3 188 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 A0A1W2PPM1 405 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 GLOD5A6NK44 160 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 WASHC1A8K0Z3 465 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 CYSRT1A8MQ03 144 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 KLRC4-KLRK1H3BQV0 150 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 DYRK3O43781 588 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 PRKRAO75569 313 aaKnown RBP10.39□□□□□ -0.75
CKS1B-206ENST00000474215 SUPT7LO94864 414 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 GBAP04062 536 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 NR2F6P10588 404 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 ALOX15P16050 662 aaPredicted RBP10.39□□□□□ -0.75
CKS1B-206ENST00000474215 IMPDH1P20839 514 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 ATP5F1P24539 256 aaPredicted RBP10.39□□□□□ -0.75
CKS1B-206ENST00000474215 RNF4P78317 190 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 CLCQ05315 142 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 RBPJQ06330 500 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.39□□□□□ -0.75
CKS1B-206ENST00000474215 UNC50Q53HI1 259 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 ZNF678Q5SXM1 525 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 C1QL3Q5VWW1 255 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 LETMD1Q6P1Q0 360 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 DGAT2L6Q6ZPD8 337 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 PAGE2Q7Z2X7 111 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 MDGA2Q7Z553 956 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 GPALPP1Q8IXQ4 340 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 ST13P4Q8IZP2 240 aaPredicted RBP10.39□□□□□ -0.75
CKS1B-206ENST00000474215 CYP4Z2PQ8N1L4 340 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 OR5L2Q8NGL0 311 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 TRPC4APQ8TEL6 797 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 ZNF721Q8TF20 911 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 MZB1Q8WU39 189 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 GPR137Q96N19 417 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 FRMD6Q96NE9 622 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 MRPL1Q9BYD6 325 aaKnown RBP10.39□□□□□ -0.75
CKS1B-206ENST00000474215 FARSBQ9NSD9 589 aaKnown RBP10.39□□□□□ -0.75
CKS1B-206ENST00000474215 COPS7AQ9UBW8 275 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 ADAM29Q9UKF5 820 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 ERVK-11Q9UQG0 969 aa10.39□□□□□ -0.75
CKS1B-206ENST00000474215 KLF13Q9Y2Y9 288 aaPredicted RBP10.39□□□□□ -0.75
CKS1B-206ENST00000474215 ARHGAP10A1A4S6 786 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 A1L4Q6 167 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 NPIPA5E9PKD4 350 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 WWP2O00308 870 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 PGRMC2O15173 223 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 ASNA1O43681 348 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 PEX1O43933 1283 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 OR4F21O95013 312 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 AIFM1O95831 613 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 PDYNP01213 254 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 SHBGP04278 402 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 IGKV3-11P04433 115 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 KLK1P06870 262 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 TNFRSF8P28908 595 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 HK2P52789 917 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 PRKAA2P54646 552 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 PLIN5Q00G26 463 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 RNFT1Q5M7Z0 435 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 CCNYL2Q5T2Q4 361 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 IL20RBQ6UXL0 311 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 FJX1Q86VR8 437 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 SLC22A9Q8IVM8 553 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 SIAH3Q8IW03 269 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 SULF2Q8IWU5 870 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 METTL4Q8N3J2 472 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 CPSF7Q8N684 471 aaKnown RBP10.38□□□□□ -0.75
CKS1B-206ENST00000474215 POGLUT1Q8NBL1 392 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 UBLCP1Q8WVY7 318 aaPredicted RBP10.38□□□□□ -0.75
CKS1B-206ENST00000474215 SELENOMQ8WWX9 145 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 SREK1Q8WXA9 508 aaKnown RBP10.38□□□□□ -0.75
CKS1B-206ENST00000474215 ASB15Q8WXK1 588 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 UCN3Q969E3 161 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 L3HYPDHQ96EM0 354 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 FBXL20Q96IG2 436 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 TMEM237Q96Q45 408 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms