RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 DCDP81605 110 aaKnown RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 PRR5P85299 388 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 MC2RQ01718 297 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 NHLH1Q02575 133 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 BIKQ13323 160 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 RUNX2Q13950 521 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 CAPRIN1Q14444 709 aaKnown RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 ISXQ2M1V0 245 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 PAGE3Q5JUK9 113 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 PDSS2Q86YH6 399 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 ASCC3Q8N3C0 2202 aaKnown RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 AMER3Q8N944 861 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 OR8J3Q8NGG0 315 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 OR5T3Q8NGG3 340 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 GTF2H4Q92759 462 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 CIDECQ96AQ7 238 aaPredicted RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 MOAP1Q96BY2 351 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 SLC7A6OSQ96CW6 309 aaPredicted RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 LIN37Q96GY3 246 aaPredicted RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 CDRT15Q96T59 188 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 CTRCQ99895 268 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 DPH2Q9BQC3 489 aaPredicted RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 TRIM15Q9C019 465 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 MKKSQ9NPJ1 570 aaPredicted RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 FBXO8Q9NRD0 319 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 C14orf105Q9NVL8 296 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 OCIAD1Q9NX40 245 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 SIDT1Q9NXL6 827 aaKnown RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 C5AR2Q9P296 337 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 MAN2B2Q9Y2E5 1009 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 RNF103-CHMP3A0A140T963 221 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 PLD2O14939 933 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 GSC2O15499 205 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 FOXS1O43638 330 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 PRKRAO75569 313 aaKnown RBP9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 CDC123O75794 336 aaPredicted RBP9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 SLITRK5O94991 958 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 IFNA16P05015 189 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 GSNP06396 782 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 CTSBP07858 339 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 CD63P08962 238 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 CCNYL3P0C7X3 344 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 C8orf89P0DMQ9 161 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 CEACAM1P13688 526 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 TNNI3P19429 210 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 NT5EP21589 574 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 UQCRC2P22695 453 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 FEN1P39748 380 aaKnown RBP9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 OR1D4P47884 311 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 XKP51811 444 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 HSD17B7P56937 341 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 MAT1AQ00266 395 aaKnown RBP9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 FOLH1Q04609 750 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 TP53BP2Q13625 1128 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 SERTAD2Q14140 314 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 TLR1Q15399 786 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 CYP51A1Q16850 503 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 SPATS1Q496A3 300 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 ZNF385BQ569K4 471 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 PWWP2BQ6NUJ5 590 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 ASCL5Q7RTU5 278 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 RETREG3Q86VR2 466 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 C10orf67Q8IYJ2 551 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 CLECL1Q8IZS7 167 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 MMP21Q8N119 569 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 GALNT15Q8N3T1 639 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 WDR36Q8NI36 951 aaKnown RBP9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 METTL21AQ8WXB1 218 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 STMN2Q93045 179 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 CCDC124Q96CT7 223 aaKnown RBP9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 FAM120BQ96EK7 910 aaKnown RBP9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 LRGUKQ96M69 825 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 DGAT2Q96PD7 388 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 TAAR9Q96RI9 348 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 CSF3RQ99062 836 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 KCTD14Q9BQ13 255 aaPredicted RBP9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 SLC35A5Q9BS91 424 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 DDX18Q9NVP1 670 aaKnown RBP9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 TAS2R7Q9NYW3 318 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 MMACHCQ9Y4U1 282 aa9.68□□□□□ -0.86
PRPF38A-202ENST00000474048 SPAARA0A1B0GVQ0 90 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 ASPDHA6ND91 283 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 ANKRD65E5RJM6 399 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 CLIC1O00299 241 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 PGRMC2O15173 223 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 CASC3O15234 703 aaKnown RBP9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 LDB3O75112 727 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 GPR75O95800 540 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 NTRK1P04629 796 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 ZCCHC18P0CG32 403 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 CCL4P13236 92 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 CPMP14384 443 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 TGM1P22735 817 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 ME2P23368 584 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 CRATP43155 626 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 ZFP36L2P47974 494 aaKnown RBP9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 HNRNPFP52597 415 aaKnown RBP9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 DMTNQ08495 405 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 COL9A2Q14055 689 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms