RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 FRYLO94915 3013 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 A0A1B0GTW7 788 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 KIF1CO43896 1103 aaKnown RBP17.01■□□□□ 0.31
VARS2-206ENST00000473916 FKBP9O95302 570 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 KRT75O95678 551 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 SNAP29O95721 258 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 CLIC3O95833 236 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 ARFIP1P53367 373 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 VSX2P58304 361 aaPredicted RBP17.01■□□□□ 0.31
VARS2-206ENST00000473916 CDK6Q00534 326 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 SRSF5Q13243 272 aaKnown RBP17.01■□□□□ 0.31
VARS2-206ENST00000473916 LAPTM4AQ15012 233 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 GPR19Q15760 415 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 PRPF38BQ5VTL8 546 aaKnown RBP17.01■□□□□ 0.31
VARS2-206ENST00000473916 SLC48A1Q6P1K1 146 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 FKBP9P1Q75LS8 142 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 STK32CQ86UX6 486 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 AVL9Q8NBF6 648 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 BBS4Q96RK4 519 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 BARD1Q99728 777 aaKnown RBP17.01■□□□□ 0.31
VARS2-206ENST00000473916 TMEM38AQ9H6F2 299 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 SMURF2Q9HAU4 748 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 KCMF1Q9P0J7 381 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 RPS6KA6Q9UK32 745 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 EME2A4GXA9 379 aaPredicted RBP17.01■□□□□ 0.31
VARS2-206ENST00000473916 GNGT2O14610 69 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 NME6O75414 186 aaPredicted RBP17.01■□□□□ 0.31
VARS2-206ENST00000473916 ARAFP10398 606 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 GPC1P35052 558 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 TSFMP43897 325 aaKnown RBP17.01■□□□□ 0.31
VARS2-206ENST00000473916 FASLGP48023 281 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 CCT3P49368 545 aaKnown RBP17.01■□□□□ 0.31
VARS2-206ENST00000473916 DSTNP60981 165 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 MRPS35P82673 323 aaKnown RBP17.01■□□□□ 0.31
VARS2-206ENST00000473916 MYBPC1Q00872 1141 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 TGM3Q08188 693 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.01■□□□□ 0.31
VARS2-206ENST00000473916 CWF19L1Q69YN2 538 aaKnown RBP17.01■□□□□ 0.31
VARS2-206ENST00000473916 ARMC6Q6NXE6 501 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 SLC36A4Q6YBV0 504 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 FAM92BQ6ZTR7 304 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 PSMA8Q8TAA3 256 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 TFAP2CQ92754 450 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 RERGQ96A58 199 aaPredicted RBP17.01■□□□□ 0.31
VARS2-206ENST00000473916 IL1RAPQ9NPH3 570 aa17.01■□□□□ 0.31
VARS2-206ENST00000473916 PI4KAP42356 2102 aa17■□□□□ 0.31
VARS2-206ENST00000473916 ARID1BQ8NFD5 2236 aaPredicted RBP17■□□□□ 0.31
VARS2-206ENST00000473916 A0A1B0GVT2 93 aa17■□□□□ 0.31
VARS2-206ENST00000473916 MYO1GB0I1T2 1018 aa17■□□□□ 0.31
VARS2-206ENST00000473916 BCAT2O15382 392 aaPredicted RBP17■□□□□ 0.31
VARS2-206ENST00000473916 NR2F6P10588 404 aa17■□□□□ 0.31
VARS2-206ENST00000473916 PRKACGP22612 351 aa17■□□□□ 0.31
VARS2-206ENST00000473916 NTSP30990 170 aa17■□□□□ 0.31
VARS2-206ENST00000473916 FNTBP49356 437 aa17■□□□□ 0.31
VARS2-206ENST00000473916 CHN2P52757 468 aa17■□□□□ 0.31
VARS2-206ENST00000473916 KCNJ10P78508 379 aa17■□□□□ 0.31
VARS2-206ENST00000473916 LTB4RQ15722 352 aa17■□□□□ 0.31
VARS2-206ENST00000473916 CARM1Q86X55 608 aa17■□□□□ 0.31
VARS2-206ENST00000473916 SLC44A2Q8IWA5 706 aaPredicted RBP17■□□□□ 0.31
VARS2-206ENST00000473916 RBM12BQ8IXT5 1001 aaKnown RBP17■□□□□ 0.31
VARS2-206ENST00000473916 OR5T3Q8NGG3 340 aa17■□□□□ 0.31
VARS2-206ENST00000473916 OR5D16Q8NGK9 328 aa17■□□□□ 0.31
VARS2-206ENST00000473916 DNASE2BQ8WZ79 361 aa17■□□□□ 0.31
VARS2-206ENST00000473916 FBXL20Q96IG2 436 aa17■□□□□ 0.31
VARS2-206ENST00000473916 C10orf90Q96M02 699 aa17■□□□□ 0.31
VARS2-206ENST00000473916 ADI1Q9BV57 179 aa17■□□□□ 0.31
VARS2-206ENST00000473916 CACNA1EQ15878 2313 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 SLC9B1P1A6NJY1 282 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 CDH3P22223 829 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 ARSFP54793 590 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 LIM2P55344 173 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 SIM1P81133 766 aaPredicted RBP16.99■□□□□ 0.31
VARS2-206ENST00000473916 SUZ12Q15022 739 aaKnown RBP16.99■□□□□ 0.31
VARS2-206ENST00000473916 MLC1Q15049 377 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 TEAD4Q15561 434 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 MAPK11Q15759 364 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 ZIK1Q3SY52 487 aaPredicted RBP16.99■□□□□ 0.31
VARS2-206ENST00000473916 IQCCQ4KMZ1 466 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 TMEM107Q6UX40 140 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 OLIG3Q7RTU3 272 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 TSEN54Q7Z6J9 526 aaKnown RBP16.99■□□□□ 0.31
VARS2-206ENST00000473916 OR4N5Q8IXE1 308 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 NATD1Q8N6N6 113 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 CSNK1A1LQ8N752 337 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 CAMKVQ8NCB2 501 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 MAP3K3Q99759 626 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 YIPF4Q9BSR8 244 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 RSPO3Q9BXY4 272 aaPredicted RBP16.99■□□□□ 0.31
VARS2-206ENST00000473916 SEMA6CQ9H3T2 930 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 LYARQ9NX58 379 aaKnown RBP16.99■□□□□ 0.31
VARS2-206ENST00000473916 PRAMEF27A3QJZ7 478 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 PRAMEF25A6NGN4 478 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 LMO7DNF2Z398 122 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 G3V2T6 193 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 HMGN4O00479 90 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 VILLO15195 856 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 CASC3O15234 703 aaKnown RBP16.99■□□□□ 0.31
VARS2-206ENST00000473916 SUV39H1O43463 412 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 GUCY1B2O75343 617 aa16.99■□□□□ 0.31
VARS2-206ENST00000473916 PIAS2O75928 621 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms