RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 B4GALT3O60512 393 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 NOS1APO75052 506 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 VNN2O95498 520 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 OPN1SWP03999 348 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 CYP17A1P05093 508 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 C1GALT1C1LP0DN25 315 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 HMGA1P17096 107 aaKnown RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 XPAP23025 273 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 TALDO1P37837 337 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 GZMKP49863 264 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 RPS13P62277 151 aaKnown RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 HBA1P69905 142 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 RAE1P78406 368 aaKnown RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 HNRNPA0Q13151 305 aaKnown RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 ADAM15Q13444 863 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 RTP2Q5QGT7 225 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 C22orf39Q6P5X5 142 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 BHLHB9Q6PI77 547 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 LUZP2Q86TE4 346 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 LAX1Q8IWV1 398 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 ZNF461Q8TAF7 563 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 C16orf78Q8WTQ4 265 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 DNAJA4Q8WW22 397 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 CREB3L1Q96BA8 519 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 PITHD1Q9GZP4 211 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 MKRN2Q9H000 416 aaKnown RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 IRF2BPLQ9H1B7 796 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 KCNN2Q9H2S1 579 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 CRISPLD1Q9H336 500 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 C11orf16Q9NQ32 467 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 SEMA3GQ9NS98 782 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 RLIMQ9NVW2 624 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 B3GNT2Q9NY97 397 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 HS3ST2Q9Y278 367 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 TTC3P53804 2025 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 TRDV1A0A1B0GX56 115 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 SGK494L7N484 410 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 TFECO14948 347 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 PI15O43692 258 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 AKAP8O43823 692 aaKnown RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 NME6O75414 186 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 CRYZL1O95825 349 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 DHFRP00374 187 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 GASTP01350 101 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 ACP2P11117 423 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 OR1D2P34982 312 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 IRS1P35568 1242 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 OR1E2P47887 323 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 MVDP53602 400 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 ATP12AP54707 1039 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 B4GALNT1Q00973 533 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 TARDBPQ13148 414 aaKnown RBP eCLIP5.83□□□□□ -1.48
HERC4-209ENST00000473533 EFR3AQ14156 821 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 TRAM1Q15629 374 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 ZNF79Q15937 498 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 SPDYE7PQ495Y7 208 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 ZNF770Q6IQ21 691 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 Q6ZNB5 142 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 SLCO4C1Q6ZQN7 724 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 PRICKLE2Q7Z3G6 844 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 COMMD6Q7Z4G1 85 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 TSEN54Q7Z6J9 526 aaKnown RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 RTN4RL1Q86UN2 441 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 FAM109AQ8N4B1 249 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 CAMKK1Q8N5S9 505 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 Q8N9G6 341 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 TEX47Q8TBZ9 253 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 HCAR2Q8TDS4 363 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 MRPS31Q92665 395 aaKnown RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 AKAP1Q92667 903 aaKnown RBP eCLIP5.83□□□□□ -1.48
HERC4-209ENST00000473533 KCTD12Q96CX2 325 aaKnown RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 NEURL3Q96EH8 262 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 B3GALT6Q96L58 329 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 DMRTB1Q96MA1 342 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 CASD1Q96PB1 797 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 WRAP53Q9BUR4 548 aaKnown RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 FNDC11Q9BVV2 318 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 BTBD1Q9H0C5 482 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 MIR1-1HGQ9H1L0 117 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 ABCB9Q9NP78 766 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 TIGARQ9NQ88 270 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 DMRT3Q9NQL9 472 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 P2RX2Q9UBL9 471 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 MAP4K5Q9Y4K4 846 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 YIPF1Q9Y548 306 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 ARHGEF33A8MVX0 844 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 PRODHO43272 600 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 GCM2O75603 506 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 GALTP07902 379 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 CSF3P09919 207 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 PEPDP12955 493 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 HSD17B2P37059 387 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 CRYBA2P53672 197 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 ATN1P54259 1190 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 SEMG2Q02383 582 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 ARHGEF6Q15052 776 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 ZNF730Q6ZMV8 503 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 QSOX2Q6ZRP7 698 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 TMPRSS11BQ86T26 416 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 NRSN1Q8IZ57 195 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms