RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CSDE1O75534 798 aaKnown RBP4.43□□□□□ -1.7
CLK1-209ENST00000472679 GAS8O95995 478 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 SLC1A6P48664 564 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 LCP2Q13094 533 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 FASTKQ14296 549 aaKnown RBP4.43□□□□□ -1.7
CLK1-209ENST00000472679 GK2Q14410 553 aaPredicted RBP4.43□□□□□ -1.7
CLK1-209ENST00000472679 MEF2DQ14814 521 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 OR1C1Q15619 314 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 CCL14Q16627 93 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 TMEM44Q2T9K0 475 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 IFI44LQ53G44 452 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 DCAF12Q5T6F0 453 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 AGAP7PQ5VUJ5 663 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 EMBQ6PCB8 327 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 NUFIP2Q7Z417 695 aaKnown RBP4.43□□□□□ -1.7
CLK1-209ENST00000472679 ERC1Q8IUD2 1116 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 CCDC71Q8IV32 467 aaPredicted RBP4.43□□□□□ -1.7
CLK1-209ENST00000472679 ANKRD27Q96NW4 1050 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 S1PR3Q99500 378 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 RPP25Q9BUL9 199 aaKnown RBP4.43□□□□□ -1.7
CLK1-209ENST00000472679 AKIRIN1Q9H9L7 192 aaPredicted RBP4.43□□□□□ -1.7
CLK1-209ENST00000472679 TECRQ9NZ01 308 aaKnown RBP4.43□□□□□ -1.7
CLK1-209ENST00000472679 FBXW2Q9UKT8 454 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 RARRES3Q9UL19 164 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 FBXO7Q9Y3I1 522 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 TEX48A0A1B0GUV7 120 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 KIAA0513O60268 411 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 IGHG3P01860 377 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 MTIF2P46199 727 aaKnown RBP4.42□□□□□ -1.7
CLK1-209ENST00000472679 HCFC1P51610 2035 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 UCP2P55851 309 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 MSLNQ13421 630 aaPredicted RBP4.42□□□□□ -1.7
CLK1-209ENST00000472679 HEPACAMQ14CZ8 416 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 CD164L2Q6UWJ8 174 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 CCDC91Q7Z6B0 441 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 ITIH5Q86UX2 942 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 C17orf64Q86WR6 236 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 SFRP1Q8N474 314 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 ZNF781Q8N8C0 355 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 LPCAT1Q8NF37 534 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 OR4L1Q8NH43 312 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 CDHR1Q96JP9 859 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 CXorf58Q96LI9 332 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 RUNDC3BQ96NL0 473 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 NT5DC2Q9H857 520 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 TSPAN16Q9UKR8 245 aa4.42□□□□□ -1.7
CLK1-209ENST00000472679 A0A1B0GTH9 108 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 A0A1B0GVY2 172 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 SRSF10O75494 262 aaKnown RBP4.41□□□□□ -1.7
CLK1-209ENST00000472679 ANXA9O76027 345 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 VENTXO95231 258 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 MT-ND1P03886 318 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 OR9G9P0C7N8 305 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 PTGER3P43115 390 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 KIAA1024LP59773 190 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 CYLC2Q14093 348 aaPredicted RBP4.41□□□□□ -1.7
CLK1-209ENST00000472679 MORF4L2Q15014 288 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 STX1AQ16623 288 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 HIGD2BQ4VC39 106 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 EPC2Q52LR7 807 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 EIPR1Q53HC9 387 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 CEACAM19Q7Z692 300 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 HPS6Q86YV9 775 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 STHQ8IWL8 128 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 FGFRL1Q8N441 504 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.41□□□□□ -1.7
CLK1-209ENST00000472679 SIDT2Q8NBJ9 832 aaKnown RBP4.41□□□□□ -1.7
CLK1-209ENST00000472679 TCP11Q8WWU5 503 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 PNPLA2Q96AD5 504 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 ESAMQ96AP7 390 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 MRPL53Q96EL3 112 aaKnown RBP4.41□□□□□ -1.7
CLK1-209ENST00000472679 C1orf147Q96MC9 270 aaPredicted RBP4.41□□□□□ -1.7
CLK1-209ENST00000472679 HSD17B14Q9BPX1 270 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 MARCH7Q9H992 704 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 DNAJC11Q9NVH1 559 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 MGAT4AQ9UM21 535 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 EXOC6BQ9Y2D4 811 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 CPQQ9Y646 472 aa4.41□□□□□ -1.7
CLK1-209ENST00000472679 TP53BP1Q12888 1972 aaPredicted RBP4.4□□□□□ -1.7
CLK1-209ENST00000472679 BCL2L11O43521 198 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 DUSP11O75319 330 aaKnown RBP4.4□□□□□ -1.71
CLK1-209ENST00000472679 GMNNO75496 209 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 GOSR1O95249 250 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 TXNDC12O95881 172 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 HPP00738 406 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 MELTFP08582 738 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 CT45A8P0DMV1 189 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 CT45A9P0DMV2 189 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 CYP3A5P20815 502 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 KCNK10P57789 538 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 KRT71Q3SY84 523 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 CT45A2Q5DJT8 189 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 SERPINA12Q8IW75 414 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 FBXW8Q8N3Y1 598 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 C10orf53Q8N6V4 93 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 GVQW1Q8N7I0 195 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 RELL2Q8NC24 303 aaPredicted RBP4.4□□□□□ -1.71
CLK1-209ENST00000472679 CHDHQ8NE62 594 aaPredicted RBP4.4□□□□□ -1.71
CLK1-209ENST00000472679 ST7LQ8TDW4 575 aa4.4□□□□□ -1.71
CLK1-209ENST00000472679 ITLN1Q8WWA0 313 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms