RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CALHM2Q9HA72 323 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 HOMER3Q9NSC5 361 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 C20orf96Q9NUD7 363 aaPredicted RBP17.42■□□□□ 0.38
SORT1-203ENST00000471996 CAMK2AQ9UQM7 478 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 NPFFR2Q9Y5X5 522 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 CHCHD2Q9Y6H1 151 aaPredicted RBP17.42■□□□□ 0.38
SORT1-203ENST00000471996 ERN1O75460 977 aaKnown RBP17.41■□□□□ 0.38
SORT1-203ENST00000471996 GUCA1CO95843 209 aa17.41■□□□□ 0.38
SORT1-203ENST00000471996 TMIGD3P0DMS9 266 aaPredicted RBP17.41■□□□□ 0.38
SORT1-203ENST00000471996 PTMSP20962 102 aa17.41■□□□□ 0.38
SORT1-203ENST00000471996 SERTAD2Q14140 314 aa17.41■□□□□ 0.38
SORT1-203ENST00000471996 RAD9BQ6WBX8 426 aa17.41■□□□□ 0.38
SORT1-203ENST00000471996 KIAA1328Q86T90 577 aa17.41■□□□□ 0.38
SORT1-203ENST00000471996 LUZP2Q86TE4 346 aa17.41■□□□□ 0.38
SORT1-203ENST00000471996 DND1Q8IYX4 353 aaKnown RBP17.41■□□□□ 0.38
SORT1-203ENST00000471996 OR10G3Q8NGC4 313 aa17.41■□□□□ 0.38
SORT1-203ENST00000471996 PPP1R14CQ8TAE6 165 aa17.41■□□□□ 0.38
SORT1-203ENST00000471996 NTNG2Q96CW9 530 aa17.41■□□□□ 0.38
SORT1-203ENST00000471996 SERINC2Q96SA4 455 aa17.41■□□□□ 0.38
SORT1-203ENST00000471996 DOHHQ9BU89 302 aa17.41■□□□□ 0.38
SORT1-203ENST00000471996 NDRG3Q9UGV2 375 aa17.41■□□□□ 0.38
SORT1-203ENST00000471996 CNOT11Q9UKZ1 510 aaKnown RBP17.41■□□□□ 0.38
SORT1-203ENST00000471996 KCNE2Q9Y6J6 123 aa17.41■□□□□ 0.38
SORT1-203ENST00000471996 CUBNO60494 3623 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 SDR42E2A6NKP2 422 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 TRIM3O75382 744 aaPredicted RBP17.4■□□□□ 0.38
SORT1-203ENST00000471996 PLA2G16P53816 162 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 TERF1P54274 439 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 CDKN2DP55273 166 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 KCTD19Q17RG1 926 aaPredicted RBP17.4■□□□□ 0.38
SORT1-203ENST00000471996 NHSL2Q5HYW2 709 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 HMBOX1Q6NT76 420 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 C9orf40Q8IXQ3 194 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 C9orf106Q8NAJ2 232 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 FAM13CQ8NE31 585 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 TTLQ8NG68 377 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 OR2L5Q8NG80 312 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 GABPB2Q8TAK5 448 aaPredicted RBP17.4■□□□□ 0.38
SORT1-203ENST00000471996 CCT6BQ92526 530 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 WDYHV1Q96HA8 205 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 ZNF597Q96LX8 424 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 C6orf203Q9P0P8 240 aaPredicted RBP17.4■□□□□ 0.38
SORT1-203ENST00000471996 SLC22A14Q9Y267 594 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 TESMINQ9Y4I5 508 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 KIAA1549Q9HCM3 1950 aa17.4■□□□□ 0.38
SORT1-203ENST00000471996 LDB3O75112 727 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 TRAPPC6AO75865 159 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 ACSL3O95573 720 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 HPNP05981 417 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 ENO2P09104 434 aaPredicted RBP17.39■□□□□ 0.37
SORT1-203ENST00000471996 FBXO45P0C2W1 286 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 CERS1P27544 350 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 SERPINB3P29508 390 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 MAGEA6P43360 314 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 CPA2P48052 419 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 MTTPP55157 894 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 IL2P60568 153 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 FOXF2Q12947 444 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 HSP90AA5PQ58FG0 334 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 SENP5Q96HI0 755 aaPredicted RBP17.39■□□□□ 0.37
SORT1-203ENST00000471996 SFXN3Q9BWM7 321 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 UGT2B28Q9BY64 529 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 GSX2Q9BZM3 304 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 REXO4Q9GZR2 422 aaKnown RBP17.39■□□□□ 0.37
SORT1-203ENST00000471996 UBTD1Q9HAC8 227 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 SLC6A5Q9Y345 797 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 IKBKGQ9Y6K9 419 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 NCKAP5O14513 1909 aa17.39■□□□□ 0.37
SORT1-203ENST00000471996 ANKRD33BA6NCL7 494 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 DEFB108AA8MXU0 73 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 SIAH2O43255 324 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 LRATO95237 230 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 TBX6O95947 436 aaPredicted RBP17.38■□□□□ 0.37
SORT1-203ENST00000471996 IGKV3-11P04433 115 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 MLNP12872 115 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 GSTM2P28161 218 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 KCNJ1P48048 391 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 CDK9P50750 372 aaKnown RBP17.38■□□□□ 0.37
SORT1-203ENST00000471996 KRTAP1-1Q07627 177 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 KIF5AQ12840 1032 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 ADPRMQ3LIE5 342 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 RBM20Q5T481 1227 aaKnown RBP17.38■□□□□ 0.37
SORT1-203ENST00000471996 TRIM40Q6P9F5 258 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 ABHD17CQ6PCB6 329 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 TMIGD1Q6UXZ0 262 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 C2CD4AQ8NCU7 369 aaPredicted RBP17.38■□□□□ 0.37
SORT1-203ENST00000471996 FAM167BQ9BTA0 163 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 UBQLN3Q9H347 655 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 IARS2Q9NSE4 1012 aaKnown RBP17.38■□□□□ 0.37
SORT1-203ENST00000471996 CAPN6Q9Y6Q1 641 aa17.38■□□□□ 0.37
SORT1-203ENST00000471996 CTIFO43310 598 aaKnown RBP17.37■□□□□ 0.37
SORT1-203ENST00000471996 H2AFYO75367 372 aaKnown RBP17.37■□□□□ 0.37
SORT1-203ENST00000471996 CLEC3AO75596 197 aa17.37■□□□□ 0.37
SORT1-203ENST00000471996 C1GALT1C1LP0DN25 315 aa17.37■□□□□ 0.37
SORT1-203ENST00000471996 HPDP32754 393 aaPredicted RBP17.37■□□□□ 0.37
SORT1-203ENST00000471996 ID2Q02363 134 aa17.37■□□□□ 0.37
SORT1-203ENST00000471996 RCAN2Q14206 197 aa17.37■□□□□ 0.37
SORT1-203ENST00000471996 TBCELQ5QJ74 424 aa17.37■□□□□ 0.37
SORT1-203ENST00000471996 DCST1Q5T197 706 aa17.37■□□□□ 0.37
SORT1-203ENST00000471996 ANKRD22Q5VYY1 191 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms