RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 DYRK3O43781 588 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 SH3BGRLO75368 114 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 FAM155BO75949 473 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 ETHE1O95571 254 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 IGHG3P01860 377 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 GMPRP36959 345 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 PIK3CBP42338 1070 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 MAGEA4P43358 317 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 STT3AP46977 705 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 SLAMF1Q13291 335 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 GXYLT1Q4G148 440 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 FAM47EQ6ZV65 393 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 CCDC91Q7Z6B0 441 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 CCDC25Q86WR0 208 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 FAM109AQ8N4B1 249 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 NUBPLQ8TB37 319 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 RGMAQ96B86 450 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 RBM18Q96H35 190 aaKnown RBP16.18■□□□□ 0.18
COL7A1-208ENST00000470076 SENP5Q96HI0 755 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-208ENST00000470076 ART5Q96L15 291 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 DGAT2Q96PD7 388 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 RAB17Q9H0T7 212 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 OR51B5Q9H339 312 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 RPF2Q9H7B2 306 aaKnown RBP16.18■□□□□ 0.18
COL7A1-208ENST00000470076 IGSF5Q9NSI5 407 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 PHF11Q9UIL8 331 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 ACOT9Q9Y305 439 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 TSC22D4Q9Y3Q8 395 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 CCDC189A1A4V9 331 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 FOXO6A8MYZ6 492 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 G3V3Y1 287 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 SAP18O00422 153 aaKnown RBP16.17■□□□□ 0.18
COL7A1-208ENST00000470076 FGF17O60258 216 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 ZNF354AO60765 605 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-208ENST00000470076 IGKV3-11P04433 115 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 P04436 131 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 IGFBP2P18065 325 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 TLX1P31314 330 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-208ENST00000470076 NR0B1P51843 470 aaKnown RBP16.17■□□□□ 0.18
COL7A1-208ENST00000470076 RAP1GDS1P52306 607 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 ARFIP1P53367 373 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 KRTAP10-9P60411 292 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 PLIN5Q00G26 463 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 C2orf54Q08AI8 447 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 PMPCAQ10713 525 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 HYAL4Q2M3T9 481 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 PIGGQ5H8A4 983 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 GPR180Q86V85 440 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 ZCCHC7Q8N3Z6 543 aaKnown RBP16.17■□□□□ 0.18
COL7A1-208ENST00000470076 RPRMLQ8N4K4 120 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 TMEM251Q8N6I4 163 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 OR5M3Q8NGP4 307 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 HUS1BQ8NHY5 278 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 RHEBL1Q8TAI7 183 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 FBXO25Q8TCJ0 367 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 FBF1Q8TES7 1133 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 TANKQ92844 425 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 SMC6Q96SB8 1091 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 KCNJ16Q9NPI9 418 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 RYDENQ9NUL5 291 aaKnown RBP16.17■□□□□ 0.18
COL7A1-208ENST00000470076 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.17■□□□□ 0.18
COL7A1-208ENST00000470076 ANGPTL3Q9Y5C1 460 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 SPG11Q96JI7 2443 aa16.17■□□□□ 0.18
COL7A1-208ENST00000470076 A0A1B0GVC2 190 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 FIGNL2A6NMB9 653 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 CCL3P10147 92 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 MTHFD2P13995 350 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 ACVR2AP27037 513 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 MAGEA5P43359 124 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 NUP107P57740 925 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 TNFRSF17Q02223 184 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 FOXO1Q12778 655 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 TBL3Q12788 808 aaKnown RBP16.16■□□□□ 0.18
COL7A1-208ENST00000470076 ASPHQ12797 758 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 DDX39BQ13838 428 aaKnown RBP16.16■□□□□ 0.18
COL7A1-208ENST00000470076 FAM83EQ2M2I3 478 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 LIPJQ5W064 366 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 TRILQ7L0X0 811 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 OR4N5Q8IXE1 308 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 TEX9Q8N6V9 391 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 SLC22A8Q8TCC7 542 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 NXNL1Q96CM4 212 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 FBXL20Q96IG2 436 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 SORBS1Q9BX66 1292 aaKnown RBP16.16■□□□□ 0.18
COL7A1-208ENST00000470076 DMRT3Q9NQL9 472 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 PNPLA3Q9NST1 481 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 ITGB1BP2Q9UKP3 347 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 ATG4BQ9Y4P1 393 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 PCDHGA11Q9Y5H2 935 aa16.16■□□□□ 0.18
COL7A1-208ENST00000470076 A0A087X1B8 175 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 NKX2-6A6NCS4 301 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 FAM90A27PA6NNH2 459 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 PLPP1O14494 284 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 AQP7O14520 342 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 SUSD5O60279 629 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 TOXO94900 526 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 PTX3P26022 381 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-208ENST00000470076 BUD31P41223 144 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-208ENST00000470076 DNASE1L1P49184 302 aa16.15■□□□□ 0.18
COL7A1-208ENST00000470076 PHEXP78562 749 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms