RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 RNF6Q9Y252 685 aa22.65■■□□□ 1.22
PTCH1-210ENST00000468211 ACOT9Q9Y305 439 aa22.65■■□□□ 1.22
PTCH1-210ENST00000468211 ATG4BQ9Y4P1 393 aa22.65■■□□□ 1.22
PTCH1-210ENST00000468211 SPACA6W5XKT8 324 aa22.65■■□□□ 1.22
PTCH1-210ENST00000468211 NINQ8N4C6 2090 aa22.65■■□□□ 1.22
PTCH1-210ENST00000468211 F8P00451 2351 aa22.64■■□□□ 1.22
PTCH1-210ENST00000468211 WASHC1A8K0Z3 465 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 NPIPA2E9PIF3 369 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 NPIPA3F8WFD2 350 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 CCL3P10147 92 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 EPB42P16452 691 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 SSTR2P30874 369 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 CASQ1P31415 396 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 STT3AP46977 705 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 DNASE1L1P49184 302 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 HNRNPH2P55795 449 aaKnown RBP22.64■■□□□ 1.21
PTCH1-210ENST00000468211 FOXO1Q12778 655 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 ASPHQ12797 758 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 MROH9Q5TGP6 573 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 MEX3BQ6ZN04 569 aaKnown RBP22.64■■□□□ 1.21
PTCH1-210ENST00000468211 C9orf40Q8IXQ3 194 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 TMEM251Q8N6I4 163 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 TREX2Q9BQ50 279 aaPredicted RBP22.64■■□□□ 1.21
PTCH1-210ENST00000468211 ZNF717Q9BY31 904 aaPredicted RBP22.64■■□□□ 1.21
PTCH1-210ENST00000468211 UCK2Q9BZX2 261 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 RAB17Q9H0T7 212 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 RPF2Q9H7B2 306 aaKnown RBP22.64■■□□□ 1.21
PTCH1-210ENST00000468211 SEMA4BQ9NPR2 832 aaPredicted RBP22.64■■□□□ 1.21
PTCH1-210ENST00000468211 PNPLA3Q9NST1 481 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 FREM3P0C091 2139 aa22.64■■□□□ 1.21
PTCH1-210ENST00000468211 ANKRD17O75179 2603 aaKnown RBP22.63■■□□□ 1.21
PTCH1-210ENST00000468211 ESYT3A0FGR9 886 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 IGKV3-11P04433 115 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 C2P06681 752 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 CELA3AP09093 270 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 SERPINB1P30740 379 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 MAGEA5P43359 124 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 RPS13P62277 151 aaKnown RBP22.63■■□□□ 1.21
PTCH1-210ENST00000468211 SLC7A5Q01650 507 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 FOLH1Q04609 750 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 NAB1Q13506 487 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 SETDB1Q15047 1291 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 PFKFB4Q16877 469 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 GXYLT1Q4G148 440 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 PIGGQ5H8A4 983 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 MYLK4Q86YV6 388 aaPredicted RBP22.63■■□□□ 1.21
PTCH1-210ENST00000468211 CCDC71Q8IV32 467 aaPredicted RBP22.63■■□□□ 1.21
PTCH1-210ENST00000468211 GOLM1Q8NBJ4 401 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 OR5L2Q8NGL0 311 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 RGMAQ96B86 450 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 DGAT2Q96PD7 388 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 FAM173AQ9BQD7 235 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 NPDC1Q9NQX5 325 aaPredicted RBP22.63■■□□□ 1.21
PTCH1-210ENST00000468211 SNX15Q9NRS6 342 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 TUBA8Q9NY65 449 aaPredicted RBP22.63■■□□□ 1.21
PTCH1-210ENST00000468211 TNFRSF10DQ9UBN6 386 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 COPS7AQ9UBW8 275 aa22.63■■□□□ 1.21
PTCH1-210ENST00000468211 NKX2-6A6NCS4 301 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 ACOT7O00154 380 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 NADKO95544 446 aaPredicted RBP22.62■■□□□ 1.21
PTCH1-210ENST00000468211 PIK3CBP42338 1070 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 RAP1GDS1P52306 607 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 NUP107P57740 925 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 TNFRSF17Q02223 184 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 MPEG1Q2M385 716 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 TMEM211Q6ICI0 200 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 ADGRD1Q6QNK2 874 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 OPN5Q6U736 354 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 LYPD8Q6UX82 237 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 SYT10Q6XYQ8 523 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 GK5Q6ZS86 529 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 FAM47EQ6ZV65 393 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 GPR180Q86V85 440 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 SLC22A16Q86VW1 577 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 OR5M9Q8NGP3 310 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 RHEBL1Q8TAI7 183 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 ANP32BQ92688 251 aaKnown RBP22.62■■□□□ 1.21
PTCH1-210ENST00000468211 UCN3Q969E3 161 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 C14orf79Q96F83 325 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 GPR78Q96P69 363 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 SACM1LQ9NTJ5 587 aa22.62■■□□□ 1.21
PTCH1-210ENST00000468211 FAM90A27PA6NNH2 459 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 KLK8O60259 260 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 EEDO75530 441 aaKnown RBP22.61■■□□□ 1.21
PTCH1-210ENST00000468211 IGHG3P01860 377 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 PIGAP37287 484 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 ETF1P62495 437 aaKnown RBP22.61■■□□□ 1.21
PTCH1-210ENST00000468211 TFF3Q07654 80 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 PMPCAQ10713 525 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 ZNF791Q3KP31 576 aaPredicted RBP22.61■■□□□ 1.21
PTCH1-210ENST00000468211 NDUFAF5Q5TEU4 345 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 PAOXQ6QHF9 649 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 RGS9BPQ6ZS82 235 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 ZCCHC7Q8N3Z6 543 aaKnown RBP22.61■■□□□ 1.21
PTCH1-210ENST00000468211 LILRB4Q8NHJ6 448 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 RND1Q92730 232 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 SGCZQ96LD1 299 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 IL1RL2Q9HB29 575 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 ZDHHC18Q9NUE0 388 aa22.61■■□□□ 1.21
PTCH1-210ENST00000468211 ADGRE2Q9UHX3 823 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms