RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 SNUPNO95149 360 aaKnown RBP12.73□□□□□ -0.37
SSBP1-206ENST00000467681 PRB1P04280 392 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 IFNA16P05015 189 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 LINC00032P0C843 101 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 NR2F6P10588 404 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 ITGAMP11215 1152 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 TNNI3P19429 210 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 NR1D1P20393 614 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 BGNP21810 368 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 PRPH2P23942 346 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 GPR143P51810 404 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 FOLH1Q04609 750 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 STX3Q13277 289 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 KIAA0040Q15053 153 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 ELAVL1Q15717 326 aaKnown RBP12.73□□□□□ -0.37
SSBP1-206ENST00000467681 IMPG1Q17R60 797 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 TTMPQ5BVD1 217 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 CRB2Q5IJ48 1285 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 SH2D4BQ5SQS7 431 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 NDUFAF5Q5TEU4 345 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 IGFL2Q6UWQ7 119 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 ISLR2Q6UXK2 745 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 TMEM132CQ8N3T6 1108 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 ZNF843Q8N446 348 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 DNAJB14Q8TBM8 379 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 BRIX1Q8TDN6 353 aaKnown RBP12.73□□□□□ -0.37
SSBP1-206ENST00000467681 ELP5Q8TE02 316 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 PTPMT1Q8WUK0 201 aaPredicted RBP12.73□□□□□ -0.37
SSBP1-206ENST00000467681 RBM18Q96H35 190 aaKnown RBP12.73□□□□□ -0.37
SSBP1-206ENST00000467681 ILKAPQ9H0C8 392 aaPredicted RBP12.73□□□□□ -0.37
SSBP1-206ENST00000467681 TEX10Q9NXF1 929 aaPredicted RBP12.73□□□□□ -0.37
SSBP1-206ENST00000467681 CES1P1Q9UKY3 287 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 WBP11Q9Y2W2 641 aaKnown RBP12.73□□□□□ -0.37
SSBP1-206ENST00000467681 FIS1Q9Y3D6 152 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 PTGDR2Q9Y5Y4 395 aa12.73□□□□□ -0.37
SSBP1-206ENST00000467681 SAGE2PA6NJ88 616 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 A8MUI8 341 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 TMEM233B4DJY2 109 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 SEC22BO75396 215 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 PRKRAO75569 313 aaKnown RBP12.72□□□□□ -0.37
SSBP1-206ENST00000467681 LYPLA1O75608 230 aaPredicted RBP12.72□□□□□ -0.37
SSBP1-206ENST00000467681 SASH3O75995 380 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 MYO1DO94832 1006 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 HSPA4LO95757 839 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 DRD2P14416 443 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 TIA1P31483 386 aaKnown RBP eCLIP12.72□□□□□ -0.372e-7■■■■□ 24.6
SSBP1-206ENST00000467681 SOX11P35716 441 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 STT3AP46977 705 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 SLC1A6P48664 564 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 TAS2R50P59544 299 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 NFATC3Q12968 1075 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 GOLGA6L1Q8N7Z2 621 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 B3GNT7Q8NFL0 401 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 OR4K14Q8NGD5 310 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 OR2T11Q8NH01 316 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 MGARPQ8TDB4 240 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 C16orf78Q8WTQ4 265 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 TWIST2Q8WVJ9 160 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 DAZLQ92904 295 aaKnown RBP12.72□□□□□ -0.37
SSBP1-206ENST00000467681 SORT1Q99523 831 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 FAIM2Q9BWQ8 316 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 C20orf27Q9GZN8 174 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 KCNK13Q9HB14 408 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 LRTM1Q9HBL6 345 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 ZBTB20Q9HC78 741 aaPredicted RBP12.72□□□□□ -0.37
SSBP1-206ENST00000467681 C1orf109Q9NX04 203 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 STMN3Q9NZ72 180 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 PTGFRNQ9P2B2 879 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 PSME2Q9UL46 239 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 DLGAP4Q9Y2H0 992 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 RAP2CQ9Y3L5 183 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 CLCA3PQ9Y6N3 262 aa12.72□□□□□ -0.37
SSBP1-206ENST00000467681 GNG14A0A1W2PPG7 69 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 C1orf226A1L170 272 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 HMGB1P1B2RPK0 211 aaPredicted RBP12.71□□□□□ -0.37
SSBP1-206ENST00000467681 PCDH7O60245 1069 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 DPM1O60762 260 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 C1QL1O75973 258 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 ANXA4P09525 319 aaPredicted RBP12.71□□□□□ -0.37
SSBP1-206ENST00000467681 SLC35E2P0CK97 266 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 ALOX15P16050 662 aaPredicted RBP12.71□□□□□ -0.37
SSBP1-206ENST00000467681 GALNSP34059 522 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 GSTM5P46439 218 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 XKP51811 444 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 BST1Q10588 318 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 KLRB1Q12918 225 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 MFAP5Q13361 173 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 B3GNTL1Q67FW5 361 aaPredicted RBP12.71□□□□□ -0.37
SSBP1-206ENST00000467681 OR52E8Q6IFG1 317 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 NOXRED1Q6NXP6 359 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 SLC48A1Q6P1K1 146 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 PTRH1Q86Y79 214 aaKnown RBP12.71□□□□□ -0.37
SSBP1-206ENST00000467681 TRIM42Q8IWZ5 723 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 ZADH2Q8N4Q0 377 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 SIRT6Q8N6T7 355 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 RBMXL3Q8N7X1 1067 aaKnown RBP12.71□□□□□ -0.37
SSBP1-206ENST00000467681 TEX19Q8NA77 164 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 MORN4Q8NDC4 146 aa12.71□□□□□ -0.37
SSBP1-206ENST00000467681 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.71□□□□□ -0.377e-10■■□□□ 14.1
SSBP1-206ENST00000467681 AGR3Q8TD06 166 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms