RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ACTR6Q9GZN1 396 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 NGBQ9NPG2 151 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 FANCFQ9NPI8 374 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 FETUBQ9UGM5 382 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 TSR3Q9UJK0 312 aaKnown RBP11.36□□□□□ -0.59
UBR4-210ENST00000466969 PTBP2Q9UKA9 531 aaKnown RBP11.36□□□□□ -0.59
UBR4-210ENST00000466969 TRHDEQ9UKU6 1024 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 CNOT11Q9UKZ1 510 aaKnown RBP11.36□□□□□ -0.59
UBR4-210ENST00000466969 RNF112Q9ULX5 631 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 AAR2Q9Y312 384 aaKnown RBP11.36□□□□□ -0.59
UBR4-210ENST00000466969 SYNDIG1LA6NDD5 238 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 E7ENX8 843 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 MYO1CO00159 1063 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 PLOD2O00469 737 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 EMC8O43402 210 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 ZNF888P0CJ79 500 aaPredicted RBP11.35□□□□□ -0.59
UBR4-210ENST00000466969 SERPINB3P29508 390 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 FOXN2P32314 431 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 NR4A2P43354 598 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 CYP1B1Q16678 543 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 KBTBD12Q3ZCT8 623 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 IQCCQ4KMZ1 466 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 TCP11X2Q5H9J9 407 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.35□□□□□ -0.59
UBR4-210ENST00000466969 CHMP1BQ7LBR1 199 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 IRF2BP2Q7Z5L9 587 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 RFX6Q8HWS3 928 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 SCUBE1Q8IWY4 988 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 SLC15A4Q8N697 577 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 FAM83FQ8NEG4 500 aaPredicted RBP11.35□□□□□ -0.59
UBR4-210ENST00000466969 OR14A16Q8NHC5 309 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 LRRC45Q96CN5 670 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 PANX3Q96QZ0 392 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 PRTFDC1Q9NRG1 225 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 FAM114A2Q9NRY5 505 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 COPS7AQ9UBW8 275 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 FEZ2Q9UHY8 353 aaPredicted RBP11.35□□□□□ -0.59
UBR4-210ENST00000466969 DLGAP4Q9Y2H0 992 aa11.35□□□□□ -0.59
UBR4-210ENST00000466969 R3HDM2Q9Y2K5 976 aaKnown RBP11.35□□□□□ -0.59
UBR4-210ENST00000466969 LOC100653049A0A140TA62 436 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 ANKRD33BA6NCL7 494 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 C3orf70A6NLC5 250 aaPredicted RBP11.34□□□□□ -0.59
UBR4-210ENST00000466969 ZNF487B1APH4 448 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 NRDCO43847 1150 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 LCMT2O60294 686 aaKnown RBP11.34□□□□□ -0.59
UBR4-210ENST00000466969 KRT34O76011 436 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 SNX4O95219 450 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 SERPIND1P05546 499 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 TNNI3P19429 210 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 EEF1GP26641 437 aaKnown RBP11.34□□□□□ -0.59
UBR4-210ENST00000466969 PPARGP37231 505 aaPredicted RBP11.34□□□□□ -0.59
UBR4-210ENST00000466969 ARFIP2P53365 341 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 HSD17B7P56937 341 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 PTRHD1Q6GMV3 140 aaKnown RBP11.34□□□□□ -0.59
UBR4-210ENST00000466969 SBSNQ6UWP8 590 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 ZNF321PQ8N8H1 164 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 ZNF480Q8WV37 535 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 KCTD4Q8WVF5 259 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 PKP4Q99569 1192 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 TRIM2Q9C040 744 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 GBA3Q9H227 469 aa11.34□□□□□ -0.59
UBR4-210ENST00000466969 IGHV4-61A0A0C4DH41 118 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 ESYT3A0FGR9 886 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 SLC22A20A6NK97 555 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 VWC2LB2RUY7 222 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 NDUFS8O00217 210 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 SLC16A8O95907 504 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 COL6A2P12110 1019 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 KCNC1P48547 511 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 NR2C2P49116 596 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 PDLIM4P50479 330 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 TAS2R40P59535 323 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 RGS1Q08116 209 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 PWP1Q13610 501 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 PRPSAP1Q14558 356 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 ITPRIPL1Q6GPH6 555 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 STAC2Q6ZMT1 411 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 C1QL4Q86Z23 238 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 CILP2Q8IUL8 1156 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 MFSD9Q8NBP5 474 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 RHBDF1Q96CC6 855 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 CTHRC1Q96CG8 243 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 RILPQ96NA2 401 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 TBL1YQ9BQ87 522 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 UNKLQ9H9P5 680 aaKnown RBP11.33□□□□□ -0.6
UBR4-210ENST00000466969 ARNT2Q9HBZ2 717 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 IKZF3Q9UKT9 509 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 SNX8Q9Y5X2 465 aa11.33□□□□□ -0.6
UBR4-210ENST00000466969 CCDC162PA2VCL2 907 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 TP53I11O14683 189 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 HCRTR2O43614 444 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 CATP04040 527 aaKnown RBP11.32□□□□□ -0.6
UBR4-210ENST00000466969 HKR1P10072 659 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 ZNF23P17027 643 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 MSH2P43246 934 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 EFNA4P52798 201 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 CCZ1BP86790 482 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 CCZ1P86791 482 aaPredicted RBP11.32□□□□□ -0.6
UBR4-210ENST00000466969 FUT7Q11130 342 aa11.32□□□□□ -0.6
UBR4-210ENST00000466969 CPNE8Q86YQ8 564 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms