RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 TP53BP2Q13625 1128 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 LEXMQ3ZCV2 418 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 TMEM52BQ4KMG9 183 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 PLAG1Q6DJT9 500 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 DEF8Q6ZN54 512 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 SZRD1Q7Z422 152 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 LRRTM4Q86VH4 590 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 HEATR4Q86WZ0 1026 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 LYSMD2Q8IV50 215 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 SPPL3Q8TCT6 385 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 RASSF5Q8WWW0 418 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 OR5M11Q96RB7 305 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 IL4I1Q96RQ9 567 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 ZNF607Q96SK3 696 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 CDADC1Q9BWV3 514 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 UCK2Q9BZX2 261 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 MYO7AQ13402 2215 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 H3BN98 237 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 H7BY64 318 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 OSMP13725 252 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 HSD17B2P37059 387 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 ZNF45Q02386 682 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 SLC13A2Q13183 592 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 ZNF234Q14588 700 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 DSG4Q86SJ6 1040 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 NUDT13Q86X67 352 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 VANGL1Q8TAA9 524 aaPredicted RBP17.41■□□□□ 0.38
SYNE4-204ENST00000465425 APOBEC4Q8WW27 367 aaKnown RBP17.41■□□□□ 0.38
SYNE4-204ENST00000465425 SMPDL3AQ92484 453 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 Q96MT0 163 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 PRAP1Q96NZ9 151 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 NRTNQ99748 197 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 PCBD2Q9H0N5 130 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 SP140LQ9H930 580 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 SEC14L3Q9UDX4 400 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 SLC23A2Q9UGH3 650 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 MGAT4BQ9UQ53 548 aa17.41■□□□□ 0.38
SYNE4-204ENST00000465425 KIAA1549LQ6ZVL6 1849 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 TLR4O00206 839 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 CCRL2O00421 344 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 KIAA0355O15063 1070 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 TBX19O60806 448 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 MED26O95402 600 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 NFATC1O95644 943 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 PCCBP05166 539 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 PSMB5P28074 263 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 SEPHS1P49903 392 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 UGT2B15P54855 530 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 TSTQ16762 297 aaKnown RBP17.4■□□□□ 0.38
SYNE4-204ENST00000465425 POC5Q8NA72 575 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 GPR32P1Q8NGA4 272 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 NXF2Q9GZY0 626 aaKnown RBP17.4■□□□□ 0.38
SYNE4-204ENST00000465425 C11orf49Q9H6J7 331 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 WASH6PQ9NQA3 447 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 SEMA3GQ9NS98 782 aa17.4■□□□□ 0.38
SYNE4-204ENST00000465425 C1QTNF3-AMACRE9PGA6 284 aa17.39■□□□□ 0.38
SYNE4-204ENST00000465425 SOX14O95416 240 aa17.39■□□□□ 0.38
SYNE4-204ENST00000465425 OXSR1O95747 527 aaPredicted RBP17.39■□□□□ 0.38
SYNE4-204ENST00000465425 H1F0P07305 194 aaKnown RBP17.39■□□□□ 0.38
SYNE4-204ENST00000465425 ERGP11308 486 aa17.39■□□□□ 0.38
SYNE4-204ENST00000465425 ELAVL4P26378 380 aaKnown RBP17.39■□□□□ 0.38
SYNE4-204ENST00000465425 TCTN3Q6NUS6 607 aa17.39■□□□□ 0.38
SYNE4-204ENST00000465425 HPS1Q92902 700 aa17.39■□□□□ 0.38
SYNE4-204ENST00000465425 RSPRY1Q96DX4 576 aa17.39■□□□□ 0.38
SYNE4-204ENST00000465425 ZNF354BQ96LW1 612 aa17.39■□□□□ 0.38
SYNE4-204ENST00000465425 TEFMQ96QE5 360 aaKnown RBP17.39■□□□□ 0.38
SYNE4-204ENST00000465425 CPNE5Q9HCH3 593 aa17.39■□□□□ 0.38
SYNE4-204ENST00000465425 SCHIP1Q9P0W5 487 aaPredicted RBP17.39■□□□□ 0.38
SYNE4-204ENST00000465425 PEX16Q9Y5Y5 336 aa17.39■□□□□ 0.38
SYNE4-204ENST00000465425 ANHXE9PGG2 379 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 HMGN4O00479 90 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 SLC28A2O43868 658 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 FGBP02675 491 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 FEN1P39748 380 aaKnown RBP17.39■□□□□ 0.37
SYNE4-204ENST00000465425 P2RY2P41231 377 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 CCT3P49368 545 aaKnown RBP17.39■□□□□ 0.37
SYNE4-204ENST00000465425 TMED10P49755 219 aaKnown RBP17.39■□□□□ 0.37
SYNE4-204ENST00000465425 PCBP4P57723 403 aaKnown RBP17.39■□□□□ 0.37
SYNE4-204ENST00000465425 PRKCDQ05655 676 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 PNCKQ6P2M8 343 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 CASP12Q6UXS9 341 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 HTRA1Q92743 480 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 RGMAQ96B86 450 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 COX14Q96I36 57 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 TM7SF3Q9NS93 570 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 CFL2Q9Y281 166 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 UGT2A1Q9Y4X1 527 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 DSPPQ9NZW4 1301 aa17.39■□□□□ 0.37
SYNE4-204ENST00000465425 TCF20Q9UGU0 1960 aaKnown RBP17.39■□□□□ 0.37
SYNE4-204ENST00000465425 HEPACAM2A8MVW5 462 aa17.38■□□□□ 0.37
SYNE4-204ENST00000465425 FAAHO00519 579 aa17.38■□□□□ 0.37
SYNE4-204ENST00000465425 OR1F1O43749 312 aa17.38■□□□□ 0.37
SYNE4-204ENST00000465425 KIAA0513O60268 411 aa17.38■□□□□ 0.37
SYNE4-204ENST00000465425 ENTPD6O75354 484 aa17.38■□□□□ 0.37
SYNE4-204ENST00000465425 SLC35G4P0C7Q5 338 aa17.38■□□□□ 0.37
SYNE4-204ENST00000465425 PIPP12273 146 aaPredicted RBP17.38■□□□□ 0.37
SYNE4-204ENST00000465425 ILKQ13418 452 aa17.38■□□□□ 0.37
SYNE4-204ENST00000465425 SEC23BQ15437 767 aa17.38■□□□□ 0.37
SYNE4-204ENST00000465425 TOR1AIP1Q5JTV8 583 aa17.38■□□□□ 0.37
SYNE4-204ENST00000465425 STEAP3Q658P3 488 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms