RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 OR4N5Q8IXE1 308 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 GBP7Q8N8V2 638 aaPredicted RBP15.94■□□□□ 0.14
VPS52-215ENST00000464425 CATSPER1Q8NEC5 780 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 DNAJB14Q8TBM8 379 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 ZNF75CPQ92670 426 aaPredicted RBP15.94■□□□□ 0.14
VPS52-215ENST00000464425 PNPLA2Q96AD5 504 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 KCNA7Q96RP8 456 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 MRPL1Q9BYD6 325 aaKnown RBP15.94■□□□□ 0.14
VPS52-215ENST00000464425 ALOXE3Q9BYJ1 711 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 SHCBP1LQ9BZQ2 653 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 C20orf27Q9GZN8 174 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 ILKAPQ9H0C8 392 aaPredicted RBP15.94■□□□□ 0.14
VPS52-215ENST00000464425 DDX31Q9H8H2 851 aaKnown RBP15.94■□□□□ 0.14
VPS52-215ENST00000464425 TNFRSF12AQ9NP84 129 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 NMRK1Q9NWW6 199 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 STMN3Q9NZ72 180 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 AHSPQ9NZD4 102 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 B3GNT3Q9Y2A9 372 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 RAP2CQ9Y3L5 183 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 TIMM22Q9Y584 194 aa15.94■□□□□ 0.14
VPS52-215ENST00000464425 SAGE2PA6NJ88 616 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 SEMA3DO95025 777 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 IFNA16P05015 189 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 KLK1P06870 262 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 ARG2P78540 354 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 CSTF3Q12996 717 aaKnown RBP15.93■□□□□ 0.14
VPS52-215ENST00000464425 IGFBP7Q16270 282 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 UGT3A2Q3SY77 523 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 SH2D4BQ5SQS7 431 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 TRIM46Q7Z4K8 759 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 NUDT13Q86X67 352 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 KIF2BQ8N4N8 673 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 Q8NA96 180 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 DYDC1Q8WWB3 177 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 SORT1Q99523 831 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 MS4A12Q9NXJ0 267 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 ZDHHC2Q9UIJ5 367 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 PHF11Q9UIL8 331 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 ASB4Q9Y574 426 aa15.93■□□□□ 0.14
VPS52-215ENST00000464425 A0A1W2PR48 441 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 WASHC1A8K0Z3 465 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 PROM1O43490 865 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 LYPLA1O75608 230 aaPredicted RBP15.92■□□□□ 0.14
VPS52-215ENST00000464425 SORBS2O94875 1100 aaKnown RBP15.92■□□□□ 0.14
VPS52-215ENST00000464425 CHEK2O96017 543 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 FAM58BPP0C7Q3 252 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 TLX1P31314 330 aaPredicted RBP15.92■□□□□ 0.14
VPS52-215ENST00000464425 HTR6P50406 440 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 ST13P50502 369 aaKnown RBP15.92■□□□□ 0.14
VPS52-215ENST00000464425 TNFRSF17Q02223 184 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 ABHD17BQ5VST6 288 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 CLEC6AQ6EIG7 209 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 MRM1Q6IN84 353 aaKnown RBP15.92■□□□□ 0.14
VPS52-215ENST00000464425 SCIMPQ6UWF3 145 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 Q6ZS92 163 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 METTL4Q8N3J2 472 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 NFAM1Q8NET5 270 aaPredicted RBP15.92■□□□□ 0.14
VPS52-215ENST00000464425 CKAP2Q8WWK9 683 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 UCN3Q969E3 161 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 ANKRD9Q96BM1 317 aaPredicted RBP15.92■□□□□ 0.14
VPS52-215ENST00000464425 MAGEB18Q96M61 343 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 CCT7Q99832 543 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 RPF2Q9H7B2 306 aaKnown RBP15.92■□□□□ 0.14
VPS52-215ENST00000464425 ZNF395Q9H8N7 513 aaPredicted RBP15.92■□□□□ 0.14
VPS52-215ENST00000464425 LYARQ9NX58 379 aaKnown RBP15.92■□□□□ 0.14
VPS52-215ENST00000464425 TEKT2Q9UIF3 430 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 DNAJC15Q9Y5T4 150 aa15.92■□□□□ 0.14
VPS52-215ENST00000464425 NBASA2RRP1 2371 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 ARHGAP10A1A4S6 786 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 DYTNA2CJ06 578 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 BLACEA4D250 179 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 GLOD5A6NK44 160 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 FGF17O60258 216 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 MAN1A2O60476 641 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 WDPCPO95876 746 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 TNNI3P19429 210 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 SERPINB3P29508 390 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 BUD31P41223 144 aaPredicted RBP15.91■□□□□ 0.14
VPS52-215ENST00000464425 RPL14P50914 215 aaKnown RBP15.91■□□□□ 0.14
VPS52-215ENST00000464425 TAS2R50P59544 299 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 OCRLQ01968 901 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 PRR30Q53SZ7 412 aaPredicted RBP15.91■□□□□ 0.14
VPS52-215ENST00000464425 ACER2Q5QJU3 275 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 CCNYL2Q5T2Q4 361 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 H3F3CQ6NXT2 135 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 RGS9BPQ6ZS82 235 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 CRLF3Q8IUI8 442 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 B3GNT7Q8NFL0 401 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 LRRC8CQ8TDW0 803 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 ELP5Q8TE02 316 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 ZNF354BQ96LW1 612 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 NPAS2Q99743 824 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 ADAP2Q9NPF8 381 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 MAP10Q9P2G4 905 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 VPS29Q9UBQ0 182 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 VTI1BQ9UEU0 232 aa15.91■□□□□ 0.14
VPS52-215ENST00000464425 AIFM1O95831 613 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 NR2F6P10588 404 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 TPP2P29144 1249 aaPredicted RBP15.9■□□□□ 0.14
VPS52-215ENST00000464425 FOLH1Q04609 750 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms