RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 WDR93Q6P2C0 686 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 ABHD17CQ6PCB6 329 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 CD163Q86VB7 1156 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 RPS19BP1Q86WX3 136 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 RPRMLQ8N4K4 120 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 L3MBTL4Q8NA19 623 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 FAM98AQ8NCA5 519 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 APCDD1LQ8NCL9 501 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 TMEM52Q8NDY8 209 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 NFAM1Q8NET5 270 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 OR7G3Q8NG95 312 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 OR52B6Q8NGF0 335 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 FAM57AQ8TBR7 257 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 EPS8L3Q8TE67 593 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZNF483Q8TF39 744 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 CHTF18Q8WVB6 975 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 UBLCP1Q8WVY7 318 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 SDCCAG3Q96C92 435 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 SCYL1Q96KG9 808 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 TMEM237Q96Q45 408 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 F2RL3Q96RI0 385 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 CSF3RQ99062 836 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 MRPL57Q9BQC6 102 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 C1QTNF3Q9BXJ4 246 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZNF717Q9BY31 904 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 DMRT3Q9NQL9 472 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 TMEM216Q9P0N5 145 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 TBK1Q9UHD2 729 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 PPT2Q9UMR5 302 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 TSC22D4Q9Y3Q8 395 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 CLDN16Q9Y5I7 305 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 IQANK1A0A1B0GTG1 560 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 TCRBV16S1A1N1A0A5B0 115 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 URADA6NGE7 173 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 ANKDD1BA6NHY2 528 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 RTCAO00442 366 aaKnown RBP7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 CDK2AP1O14519 115 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 PRRG2O14669 202 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 UGDHO60701 494 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 SMIM24O75264 130 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 SCELO95171 688 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 ETHE1O95571 254 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 NUDT17P0C025 328 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 RNH1P13489 461 aaKnown RBP7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 EPB42P16452 691 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 MAOAP21397 527 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 IL10P22301 178 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 SLCO1A2P46721 670 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 PIK3CGP48736 1102 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 CYB561P49447 251 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 MEOX1P50221 254 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 HLCSP50747 726 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 TAS2R50P59544 299 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 BTG2P78543 158 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 RASA2Q15283 850 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 MAPKAPK3Q16644 382 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 EMC4Q5J8M3 183 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 LIPJQ5W064 366 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 MED27Q6P2C8 311 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 QSOX2Q6ZRP7 698 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 HORMAD2Q8N7B1 307 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 OR2L5Q8NG80 312 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 OR2W6PQ8NHA6 318 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 HUS1BQ8NHY5 278 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 WDR20Q8TBZ3 569 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 ACMSDQ8TDX5 336 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 CA5BP1Q8WTZ4 195 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 CCT6BQ92526 530 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 CAVIN3Q969G5 261 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 TBC1D20Q96BZ9 403 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 POM121Q96HA1 1249 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 CDK15Q96Q40 435 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 NTMT1Q9BV86 223 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 PRR14Q9BWN1 585 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 REXO4Q9GZR2 422 aaKnown RBP7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 NOL11Q9H8H0 719 aaKnown RBP7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 IPPKQ9H8X2 491 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 PRDM7Q9NQW5 492 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 TNFRSF10DQ9UBN6 386 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZNF225Q9UK10 706 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZNF223Q9UK11 482 aaPredicted RBP7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 TMCO1Q9UM00 188 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 RNF11Q9Y3C5 154 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 TNPO3Q9Y5L0 923 aaKnown RBP7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 DOCK7Q96N67 2140 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 KIAA1549Q9HCM3 1950 aa7.37□□□□□ -1.23
CDC42BPA-210ENST00000462553 MED12Q93074 2177 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 A0A1B0GTH9 108 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 NKX2-6A6NCS4 301 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 SMIM23A6NLE4 172 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 H0YIV9 168 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 CYR61O00622 381 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 PPP6CO00743 305 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 PLPP1O14494 284 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 TFECO14948 347 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 HS6ST1O60243 411 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 DLX3O60479 287 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 B4GALT2O60909 372 aa7.36□□□□□ -1.23
CDC42BPA-210ENST00000462553 SH3BGRLO75368 114 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms