RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TLX1P31314 330 aaPredicted RBP9.45□□□□□ -0.9
SF3A3-204ENST00000462258 BSGP35613 385 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 CA7P43166 264 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 STT3AP46977 705 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 HK2P52789 917 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 IFT88Q13099 833 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.45□□□□□ -0.9
SF3A3-204ENST00000462258 FAM153CQ494X1 144 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 C18orf63Q68DL7 685 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 TTC19Q6DKK2 380 aaPredicted RBP9.45□□□□□ -0.9
SF3A3-204ENST00000462258 MRM1Q6IN84 353 aaKnown RBP9.45□□□□□ -0.9
SF3A3-204ENST00000462258 ADGRD1Q6QNK2 874 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 TIFABQ6ZNK6 161 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 RPS27LQ71UM5 84 aaKnown RBP9.45□□□□□ -0.9
SF3A3-204ENST00000462258 LCA5Q86VQ0 697 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 SIAH3Q8IW03 269 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 OR4N5Q8IXE1 308 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 GPALPP1Q8IXQ4 340 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 C7orf57Q8NEG2 295 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 OR4F6Q8NGB9 312 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 OR8K3Q8NH51 312 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 ASB15Q8WXK1 588 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 TANKQ92844 425 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 RELTQ969Z4 430 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 RASL10BQ96S79 203 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 SERPINI1Q99574 410 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 NTMT1Q9BV86 223 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 C1QTNF3Q9BXJ4 246 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 TXLNGYQ9BZA5 131 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 ELOVL6Q9H5J4 265 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 DDX31Q9H8H2 851 aaKnown RBP9.45□□□□□ -0.9
SF3A3-204ENST00000462258 LIN28AQ9H9Z2 209 aaKnown RBP9.45□□□□□ -0.9
SF3A3-204ENST00000462258 HPF1Q9NWY4 346 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 PSD3Q9NYI0 1048 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 MYOTQ9UBF9 498 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 SUCOQ9UBS9 1254 aaKnown RBP9.45□□□□□ -0.9
SF3A3-204ENST00000462258 FETUBQ9UGM5 382 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 NPIPA1Q9UND3 350 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 ERVK-11Q9UQG0 969 aa9.45□□□□□ -0.9
SF3A3-204ENST00000462258 YARS2Q9Y2Z4 477 aaKnown RBP9.45□□□□□ -0.9
SF3A3-204ENST00000462258 EXPH5Q8NEV8 1989 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 A0A1B0GTL3 188 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 WWP2O00308 870 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 TFECO14948 347 aaPredicted RBP9.44□□□□□ -0.9
SF3A3-204ENST00000462258 PROM1O43490 865 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 OR10H2O60403 315 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 WISP2O76076 250 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 OR6B1O95007 311 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 GBAP04062 536 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 TSPAN8P19075 237 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 TAC1P20366 129 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 RFC3P40938 356 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 SOX3P41225 446 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 CASP6P55212 293 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 CDH13P55290 713 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 GPR85P60893 370 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 HERVK_113P63132 956 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 RNF4P78317 190 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 SLC29A2Q14542 456 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 SPRED3Q2MJR0 410 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 RNFT1Q5M7Z0 435 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 TEX35Q5T0J7 233 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 OR52E8Q6IFG1 317 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 LETMD1Q6P1Q0 360 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 MDGA2Q7Z553 956 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 MILR1Q7Z6M3 343 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 SULF2Q8IWU5 870 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 ST13P4Q8IZP2 240 aaPredicted RBP9.44□□□□□ -0.9
SF3A3-204ENST00000462258 TMEM151AQ8N4L1 468 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 POGLUT1Q8NBL1 392 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 PSD4Q8NDX1 1056 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 ZNF721Q8TF20 911 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 MTFMTQ96DP5 389 aaKnown RBP9.44□□□□□ -0.9
SF3A3-204ENST00000462258 CCDC120Q96HB5 630 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 FBXL20Q96IG2 436 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 ART5Q96L15 291 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 TMEM237Q96Q45 408 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 PELOQ9BRX2 385 aaKnown RBP9.44□□□□□ -0.9
SF3A3-204ENST00000462258 CNPPD1Q9BV87 410 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 ERVK-6Q9BXR3 956 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 MRPL1Q9BYD6 325 aaKnown RBP9.44□□□□□ -0.9
SF3A3-204ENST00000462258 EPB41L4BQ9H329 900 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 WDR41Q9HAD4 459 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 TIMMDC1Q9NPL8 285 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 TEX10Q9NXF1 929 aaPredicted RBP9.44□□□□□ -0.9
SF3A3-204ENST00000462258 TMEM216Q9P0N5 145 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 TRPS1Q9UHF7 1281 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 ASB4Q9Y574 426 aa9.44□□□□□ -0.9
SF3A3-204ENST00000462258 NCOA6Q14686 2063 aaPredicted RBP9.44□□□□□ -0.9
SF3A3-204ENST00000462258 EML6Q6ZMW3 1958 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 A0A1W2PR48 441 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 ARHGAP10A1A4S6 786 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 GLOD5A6NK44 160 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 KLRC4-KLRK1H3BQV0 150 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 GOLGA8RI6L899 631 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 HRKO00198 91 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 CCL21O00585 134 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 PPP6CO00743 305 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 PEX1O43933 1283 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 IGKV3-11P04433 115 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms