RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 PHF11Q9UIL8 331 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 IKBKGQ9Y6K9 419 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 GTF3C1Q12789 2109 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 ARHGAP10A1A4S6 786 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 FOXE1O00358 373 aaPredicted RBP17.57■□□□□ 0.4
VARS-220ENST00000461874 PROM1O43490 865 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 EEDO75530 441 aaKnown RBP17.57■□□□□ 0.4
VARS-220ENST00000461874 CLDN9O95484 217 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 COX7A2P14406 83 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 AGAP20933 346 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 GRNP28799 593 aaKnown RBP17.57■□□□□ 0.4
VARS-220ENST00000461874 TLX1P31314 330 aaPredicted RBP17.57■□□□□ 0.4
VARS-220ENST00000461874 BSGP35613 385 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 NEK2P51955 445 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 HNRNPH2P55795 449 aaKnown RBP17.57■□□□□ 0.4
VARS-220ENST00000461874 TNFRSF17Q02223 184 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 FOLH1Q04609 750 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 CUL3Q13618 768 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 MRM1Q6IN84 353 aaKnown RBP17.57■□□□□ 0.4
VARS-220ENST00000461874 TAOK1Q7L7X3 1001 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 DOLPP1Q86YN1 238 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 TICAM1Q8IUC6 712 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 AGAP11Q8TF27 550 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 PHF21BQ96EK2 531 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 RBM18Q96H35 190 aaKnown RBP17.57■□□□□ 0.4
VARS-220ENST00000461874 SENP5Q96HI0 755 aaPredicted RBP17.57■□□□□ 0.4
VARS-220ENST00000461874 DGAT2Q96PD7 388 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 PHF12Q96QT6 1004 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 NOL11Q9H8H0 719 aaKnown RBP17.57■□□□□ 0.4
VARS-220ENST00000461874 DDX31Q9H8H2 851 aaKnown RBP17.57■□□□□ 0.4
VARS-220ENST00000461874 DEPPQ9NTK1 212 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 COPS7AQ9UBW8 275 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 TMCO1Q9UM00 188 aa17.57■□□□□ 0.4
VARS-220ENST00000461874 A0A0A6YYD5 115 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 STX16-NPEPL1H3BU86 382 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 OR7A17O14581 309 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 STX16O14662 325 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 HS6ST1O60243 411 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 KRT38O76015 456 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 COL6A2P12110 1019 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 HTR1EP28566 365 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 SMSP52788 366 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 ZNF630Q2M218 657 aaPredicted RBP17.56■□□□□ 0.4
VARS-220ENST00000461874 TSNAXIP1Q2TAA8 658 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 CMPK2Q5EBM0 449 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 OR52B6Q8NGF0 335 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 DCAKDQ8WVC6 231 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 ATP6V1E2Q96A05 226 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 PPWD1Q96BP3 646 aaKnown RBP17.56■□□□□ 0.4
VARS-220ENST00000461874 SCYL1Q96KG9 808 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 LYARQ9NX58 379 aaKnown RBP17.56■□□□□ 0.4
VARS-220ENST00000461874 XPR1Q9UBH6 696 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 ZNF180Q9UJW8 692 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 PPT2Q9UMR5 302 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 ASB4Q9Y574 426 aa17.56■□□□□ 0.4
VARS-220ENST00000461874 A0A1B0GTH9 108 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 PINLYPA6NC86 204 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 POC1B-GALNT4F8VUJ3 575 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 PRRG2O14669 202 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 TMPRSS11DO60235 418 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 ZNF354AO60765 605 aaPredicted RBP17.55■□□□□ 0.4
VARS-220ENST00000461874 PRKRAO75569 313 aaKnown RBP17.55■□□□□ 0.4
VARS-220ENST00000461874 IGKV3-11P04433 115 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 CNTFP26441 200 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 BUD31P41223 144 aaPredicted RBP17.55■□□□□ 0.4
VARS-220ENST00000461874 CCNG1P51959 295 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 PLIN5Q00G26 463 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 MPEG1Q2M385 716 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 ZNF750Q32MQ0 723 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 DGAT2L6Q6ZPD8 337 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 RTL4Q6ZR62 310 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 LURAP1LQ8IV03 231 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 OR52N2Q8NGI0 321 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 NUBPLQ8TB37 319 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 SGCZQ96LD1 299 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 CDK15Q96Q40 435 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 NTMT1Q9BV86 223 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 PLSCR2Q9NRY7 297 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 PCTPQ9UKL6 214 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 ABCA12Q86UK0 2595 aa17.55■□□□□ 0.4
VARS-220ENST00000461874 A0A087WUV0 522 aaPredicted RBP17.54■□□□□ 0.4
VARS-220ENST00000461874 A0A0G2JMM0 328 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 A0A1W2PPB8 328 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 A0A1W2PR48 441 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 A0A1W2PRS3 328 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 WASHC1A8K0Z3 465 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 KIR3DP1A8MWS1 328 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 TRIM49D1C9J1S8 452 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 E9PLN8 166 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 HRKO00198 91 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 ADAM10O14672 748 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 DYRK3O43781 588 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 SMIM24O75264 130 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 GPR75O95800 540 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 FAM58BPP0C7Q3 252 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 PRF1P14222 555 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 ALOX15P16050 662 aaPredicted RBP17.54■□□□□ 0.4
VARS-220ENST00000461874 PTGS2P35354 604 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 PIGGQ5H8A4 983 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 OPN5Q6U736 354 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms