RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 C14orf105Q9NVL8 296 aa13.76□□□□□ -0.21
NCK1-202ENST00000460960 TRPS1Q9UHF7 1281 aa13.76□□□□□ -0.21
NCK1-202ENST00000460960 MID2Q9UJV3 735 aa13.76□□□□□ -0.21
NCK1-202ENST00000460960 PCDHGA11Q9Y5H2 935 aa13.76□□□□□ -0.21
NCK1-202ENST00000460960 PTGDR2Q9Y5Y4 395 aa13.76□□□□□ -0.21
NCK1-202ENST00000460960 NCOA6Q14686 2063 aaPredicted RBP13.76□□□□□ -0.21
NCK1-202ENST00000460960 IGLV3-12A0A075B6K2 115 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 MANBAO00462 879 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 TM9SF1O15321 606 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 ITM2AO43736 263 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 LYPLA1O75608 230 aaPredicted RBP13.75□□□□□ -0.21
NCK1-202ENST00000460960 ZWINTO95229 277 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 NSA2O95478 260 aaKnown RBP13.75□□□□□ -0.21
NCK1-202ENST00000460960 ESRRBO95718 433 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 MLYCDO95822 493 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 HPDP32754 393 aaPredicted RBP13.75□□□□□ -0.21
NCK1-202ENST00000460960 PIK3CBP42338 1070 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 KIR3DL1P43629 444 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 BTN3A2P78410 334 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 RUNX2Q13950 521 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 PCOLCEQ15113 449 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 CHI3L2Q15782 390 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 NDUFA9Q16795 377 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 ARL13AQ5H913 290 aaPredicted RBP13.75□□□□□ -0.21
NCK1-202ENST00000460960 FRG2Q64ET8 278 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 FCRLBQ6BAA4 426 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 CLEC6AQ6EIG7 209 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 ABHD17CQ6PCB6 329 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 ZC3H7AQ8IWR0 971 aaKnown RBP13.75□□□□□ -0.21
NCK1-202ENST00000460960 OR2L5Q8NG80 312 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 UBE2E3Q969T4 207 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 GAL3ST3Q96A11 431 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 FRG2BQ96QU4 278 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 PAIP2Q9BPZ3 127 aaKnown RBP13.75□□□□□ -0.21
NCK1-202ENST00000460960 ZNF717Q9BY31 904 aaPredicted RBP13.75□□□□□ -0.21
NCK1-202ENST00000460960 C20orf27Q9GZN8 174 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 REXO4Q9GZR2 422 aaKnown RBP13.75□□□□□ -0.21
NCK1-202ENST00000460960 RNF32Q9H0A6 362 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 STMN4Q9H169 189 aaPredicted RBP13.75□□□□□ -0.21
NCK1-202ENST00000460960 ANKHQ9HCJ1 492 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 PRDM7Q9NQW5 492 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 MKL2Q9ULH7 1088 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 TSC22D4Q9Y3Q8 395 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 TACC2O95359 2948 aa13.75□□□□□ -0.21
NCK1-202ENST00000460960 IGHV3-20A0A0C4DH32 117 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 NPIPA5E9PKD4 350 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 PLPP1O14494 284 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 CHST10O43529 356 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 SEC24DO94855 1032 aaPredicted RBP13.74□□□□□ -0.21
NCK1-202ENST00000460960 ICAM2P13598 275 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 ABOP16442 354 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 CAPN3P20807 821 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 AGAP20933 346 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 BGNP21810 368 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 CERS1P27544 350 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 GSTM2P28161 218 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 PKNOX1P55347 436 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 STXBP1P61764 594 aaKnown RBP13.74□□□□□ -0.21
NCK1-202ENST00000460960 ALDH6A1Q02252 535 aaKnown RBP13.74□□□□□ -0.21
NCK1-202ENST00000460960 RCN2Q14257 317 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 ABRAXAS2Q15018 415 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 HERC3Q15034 1050 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 DEPDC1Q5TB30 811 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 KHDRBS2Q5VWX1 349 aaKnown RBP13.74□□□□□ -0.21
NCK1-202ENST00000460960 TTC19Q6DKK2 380 aaPredicted RBP13.74□□□□□ -0.21
NCK1-202ENST00000460960 ABHD13Q7L211 337 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 NUDCD3Q8IVD9 361 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 OR51Q1Q8NH59 317 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 METTL21AQ8WXB1 218 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 MVB12AQ96EY5 273 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 SEC16BQ96JE7 1060 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 ZNF700Q9H0M5 742 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 PRM3Q9NNZ6 103 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 MKKSQ9NPJ1 570 aaPredicted RBP13.74□□□□□ -0.21
NCK1-202ENST00000460960 ANKRD10Q9NXR5 420 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 NPIPA1Q9UND3 350 aa13.74□□□□□ -0.21
NCK1-202ENST00000460960 MTORP42345 2549 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 ZFHX3Q15911 3703 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 H0YIG0 161 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 FOXE1O00358 373 aaPredicted RBP13.73□□□□□ -0.21
NCK1-202ENST00000460960 ZNHIT1O43257 154 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 NPHS1O60500 1241 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 EEDO75530 441 aaKnown RBP13.73□□□□□ -0.21
NCK1-202ENST00000460960 GBAP04062 536 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 C8orf89P0DMQ9 161 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 AVPR1BP47901 424 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 HNRNPFP52597 415 aaKnown RBP13.73□□□□□ -0.21
NCK1-202ENST00000460960 IFT88Q13099 833 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 TESK1Q15569 626 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 BTBD16Q32M84 506 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 MINDY4Q4G0A6 757 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 MEX3BQ6ZN04 569 aaKnown RBP13.73□□□□□ -0.21
NCK1-202ENST00000460960 SPPL2CQ8IUH8 684 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 BEST3Q8N1M1 668 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 CA13Q8N1Q1 262 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 TMEM52Q8NDY8 209 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 METTL6Q8TCB7 284 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 AGR3Q8TD06 166 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 ADAMTS18Q8TE60 1221 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 SELENOMQ8WWX9 145 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms