RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 NAXEQ8NCW5 288 aa10.07□□□□□ -0.8
VAMP7-203ENST00000460621 OR10Q1Q8NGQ4 319 aa10.07□□□□□ -0.8
VAMP7-203ENST00000460621 DAZLQ92904 295 aaKnown RBP10.07□□□□□ -0.8
VAMP7-203ENST00000460621 GPR22Q99680 433 aa10.07□□□□□ -0.8
VAMP7-203ENST00000460621 ZNF559Q9BR84 538 aa10.07□□□□□ -0.8
VAMP7-203ENST00000460621 CAPS2Q9BXY5 557 aa10.07□□□□□ -0.8
VAMP7-203ENST00000460621 PITHD1Q9GZP4 211 aaPredicted RBP10.07□□□□□ -0.8
VAMP7-203ENST00000460621 SLC6A15Q9H2J7 730 aa10.07□□□□□ -0.8
VAMP7-203ENST00000460621 SACM1LQ9NTJ5 587 aa10.07□□□□□ -0.8
VAMP7-203ENST00000460621 KCNN3Q9UGI6 736 aa10.07□□□□□ -0.8
VAMP7-203ENST00000460621 MRPS33Q9Y291 106 aaKnown RBP10.07□□□□□ -0.8
VAMP7-203ENST00000460621 ANKHD1Q8IWZ3 2542 aaKnown RBP10.07□□□□□ -0.8
VAMP7-203ENST00000460621 FAM221AA4D161 298 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 LRRC14BA6NHZ5 514 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 FAM159BA6NKW6 160 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 BCKDKO14874 412 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 CLGNO14967 610 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 CCNT2O60583 730 aaKnown RBP10.06□□□□□ -0.8
VAMP7-203ENST00000460621 MTHFD2P13995 350 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 HOXB4P17483 251 aaPredicted RBP10.06□□□□□ -0.8
VAMP7-203ENST00000460621 TCP1P17987 556 aaKnown RBP10.06□□□□□ -0.8
VAMP7-203ENST00000460621 HIST1H1TP22492 207 aaPredicted RBP10.06□□□□□ -0.8
VAMP7-203ENST00000460621 STT3AP46977 705 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 ZFP36L2P47974 494 aaKnown RBP10.06□□□□□ -0.8
VAMP7-203ENST00000460621 IRF8Q02556 426 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 PCDH1Q08174 1060 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 SLC10A1Q14973 349 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 TRADDQ15628 312 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 PDK4Q16654 411 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 CDKL4Q5MAI5 379 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 C1orf185Q5T7R7 199 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 PRAMEF20Q5VT98 475 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 PAOXQ6QHF9 649 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 B3GNT6Q6ZMB0 384 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 GK5Q6ZS86 529 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 CMC1Q7Z7K0 106 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 TMEM200AQ86VY9 491 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 ZZZ3Q8IYH5 903 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 RELL2Q8NC24 303 aaPredicted RBP10.06□□□□□ -0.8
VAMP7-203ENST00000460621 BBOF1Q8ND07 529 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 OR7G3Q8NG95 312 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 NUBPLQ8TB37 319 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 PAQR8Q8TEZ7 354 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 EXT2Q93063 718 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 KIAA1191Q96A73 305 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 SGCZQ96LD1 299 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 KCNC2Q96PR1 638 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 ATOH8Q96SQ7 321 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 RBBP8Q99708 897 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 TBCDQ9BTW9 1192 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 EFCAB11Q9BUY7 163 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 CD244Q9BZW8 370 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 CXXC4Q9H2H0 198 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 ZNF703Q9H7S9 590 aaPredicted RBP10.06□□□□□ -0.8
VAMP7-203ENST00000460621 COPS7BQ9H9Q2 264 aaPredicted RBP10.06□□□□□ -0.8
VAMP7-203ENST00000460621 CCM2LQ9NUG4 571 aaPredicted RBP10.06□□□□□ -0.8
VAMP7-203ENST00000460621 ALKBH4Q9NXW9 302 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 CD274Q9NZQ7 290 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 CNOT11Q9UKZ1 510 aaKnown RBP10.06□□□□□ -0.8
VAMP7-203ENST00000460621 CHCHD2Q9Y6H1 151 aaPredicted RBP10.06□□□□□ -0.8
VAMP7-203ENST00000460621 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.06□□□□□ -0.8
VAMP7-203ENST00000460621 MPDZO75970 2070 aa10.06□□□□□ -0.8
VAMP7-203ENST00000460621 NIPBLQ6KC79 2804 aaeCLIP10.06□□□□□ -0.8
VAMP7-203ENST00000460621 A0A088AWK7 358 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 TRGV5A0A0B4J1U4 118 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 TCRBV9S1A1TA0A576 114 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 EFCAB8A8MWE9 144 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 FOXO6A8MYZ6 492 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 UBXN8O00124 270 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 ACOT7O00154 380 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 PLPP1O14494 284 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 TMPRSS11DO60235 418 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 SUSD5O60279 629 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 EEDO75530 441 aaKnown RBP10.05□□□□□ -0.8
VAMP7-203ENST00000460621 SLC35E2BP0CK96 405 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 PCNAP12004 261 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 ZNF10P21506 573 aaPredicted RBP10.05□□□□□ -0.8
VAMP7-203ENST00000460621 CPN2P22792 545 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 MAN2A2P49641 1150 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 FOLH1Q04609 750 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 MYBPHQ13203 477 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 SLAMF1Q13291 335 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 SERTAD2Q14140 314 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 DEPDC1Q5TB30 811 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 FNDC7Q5VTL7 733 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 KHDRBS2Q5VWX1 349 aaKnown RBP10.05□□□□□ -0.8
VAMP7-203ENST00000460621 SLC22A10Q63ZE4 541 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 BICRALQ6AI39 1079 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 OPN5Q6U736 354 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 ARSKQ6UWY0 536 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 LRRC25Q8N386 305 aaPredicted RBP10.05□□□□□ -0.8
VAMP7-203ENST00000460621 TCAIMQ8N3R3 496 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 ZNF441Q8N8Z8 693 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 OR10G3Q8NGC4 313 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 OR5L2Q8NGL0 311 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 NTNG2Q96CW9 530 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 RUNDC3BQ96NL0 473 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 KRT12Q99456 494 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 ALG9Q9H6U8 611 aa10.05□□□□□ -0.8
VAMP7-203ENST00000460621 SAYSD1Q9NPB0 183 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms