RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 GRXCR2A6NFK2 248 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 OR52A4PA6NMU1 304 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 YY2O15391 372 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 KAT7O95251 611 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 CD36P16671 472 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 ENPP1P22413 925 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 KCNC3Q14003 757 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 DUSP7Q16829 419 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 CDKL4Q5MAI5 379 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 SPANXN2Q5MJ10 180 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 NXNL2Q5VZ03 156 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 FBXO46Q6PJ61 603 aaPredicted RBP14.7□□□□□ -0.06
LMNB1-203ENST00000460265 CEACAM20Q6UY09 585 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 TECPR1Q7Z6L1 1165 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 CYP4Z1Q86W10 505 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 LRRC20Q8TCA0 184 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 UBE2E3Q969T4 207 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 DACT3Q96B18 629 aaPredicted RBP14.7□□□□□ -0.06
LMNB1-203ENST00000460265 FEVQ99581 238 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 C17orf62Q9BQA9 187 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 MMP27Q9H306 513 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 RC3H2Q9HBD1 1191 aaKnown RBP14.7□□□□□ -0.06
LMNB1-203ENST00000460265 CUEDC1Q9NWM3 386 aaPredicted RBP14.7□□□□□ -0.06
LMNB1-203ENST00000460265 USE1Q9NZ43 259 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 TMCC3Q9ULS5 477 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 URB1O60287 2271 aaKnown RBP14.7□□□□□ -0.06
LMNB1-203ENST00000460265 KIAA0355O15063 1070 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 RB1P06400 928 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 HNRNPA1P09651 372 aaKnown RBP eCLIP14.7□□□□□ -0.06
LMNB1-203ENST00000460265 KELP23276 732 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 RPP38P78345 283 aaKnown RBP14.7□□□□□ -0.06
LMNB1-203ENST00000460265 GAB1Q13480 694 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 CTU2Q2VPK5 515 aaKnown RBP14.7□□□□□ -0.06
LMNB1-203ENST00000460265 CPZQ66K79 652 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 NXPE4Q6UWF7 544 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 CHFRQ96EP1 664 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 LGR4Q9BXB1 951 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 RHBGQ9H310 441 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 KLHL42Q9P2K6 505 aa14.7□□□□□ -0.06
LMNB1-203ENST00000460265 SLC5A10A0PJK1 596 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 SLC28A2O43868 658 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 ARHGEF15O94989 841 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 BCHEP06276 602 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 SRPRAP08240 638 aaKnown RBP14.69□□□□□ -0.06
LMNB1-203ENST00000460265 FPR1P21462 350 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 CTSKP43235 329 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 STK11Q15831 433 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 RAB43Q86YS6 212 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 PAPD5Q8NDF8 572 aaKnown RBP14.69□□□□□ -0.06
LMNB1-203ENST00000460265 DOK4Q8TEW6 326 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 TRMT61BQ9BVS5 477 aaKnown RBP14.69□□□□□ -0.06
LMNB1-203ENST00000460265 WDR26Q9H7D7 661 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 C12orf10Q9HB07 376 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 IL1RAPQ9NPH3 570 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 SPTBP11277 2137 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 OR10H3O60404 316 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 NR2F1P10589 423 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 GLULP15104 373 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 IDSP22304 550 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 GABARAPL2P60520 117 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 RAB8AP61006 207 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 CD83Q01151 205 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 SLC5A12Q1EHB4 618 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 ARMC4Q5T2S8 1044 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 METTL2BQ6P1Q9 378 aaKnown RBP14.69□□□□□ -0.06
LMNB1-203ENST00000460265 ZNF517Q6ZMY9 492 aaPredicted RBP14.69□□□□□ -0.06
LMNB1-203ENST00000460265 FAM83HQ6ZRV2 1179 aaPredicted RBP14.69□□□□□ -0.06
LMNB1-203ENST00000460265 RRM2BQ7LG56 351 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 GLRX5Q86SX6 157 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 ZNF605Q86T29 641 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 NOXA1Q86UR1 476 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 FAM129CQ86XR2 697 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 PARP16Q8N5Y8 322 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 AMER2Q8N7J2 671 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 C16orf78Q8WTQ4 265 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 ZNF514Q96K75 400 aaPredicted RBP14.69□□□□□ -0.06
LMNB1-203ENST00000460265 RHNO1Q9BSD3 238 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 TM9SF3Q9HD45 589 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 FBXL12Q9NXK8 326 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 SLC23A2Q9UGH3 650 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 PPIL1Q9Y3C6 166 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 H3BUI4 141 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 UPK1AO00322 258 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 IFNA14P01570 189 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 RPN2P04844 631 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 CHRM5P08912 532 aaPredicted RBP14.69□□□□□ -0.06
LMNB1-203ENST00000460265 PPIBP23284 216 aaKnown RBP14.69□□□□□ -0.06
LMNB1-203ENST00000460265 IL32P24001 234 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 CLCA4Q14CN2 919 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 AMIGO1Q86WK6 493 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 ZZZ3Q8IYH5 903 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 CHCHD4Q8N4Q1 142 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 OR10G2Q8NGC3 310 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 SLC6A17Q9H1V8 727 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 RWDD3Q9Y3V2 267 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 PCDHGB3Q9Y5G1 929 aa14.69□□□□□ -0.06
LMNB1-203ENST00000460265 J3KTA2 159 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 CDK5R2Q13319 367 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 GGTA1PQ4G0N0 100 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 IFI44LQ53G44 452 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms