RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 PHBP35232 272 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 PIK3CGP48736 1102 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 SERPINB8P50452 374 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 PLGLB1Q02325 96 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 SLAMF1Q13291 335 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 PFKFB4Q16877 469 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 NDUFAF5Q5TEU4 345 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 NUBPLQ8TB37 319 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 CA5BP1Q8WTZ4 195 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 SDCCAG3Q96C92 435 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 SCYL1Q96KG9 808 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 SGCZQ96LD1 299 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 SORBS1Q9BX66 1292 aaKnown RBP21.1■□□□□ 0.97
PTPN4-207ENST00000460162 TP63Q9H3D4 680 aaPredicted RBP21.1■□□□□ 0.97
PTPN4-207ENST00000460162 RPF2Q9H7B2 306 aaKnown RBP21.1■□□□□ 0.97
PTPN4-207ENST00000460162 ZDHHC11Q9H8X9 412 aa21.1■□□□□ 0.97
PTPN4-207ENST00000460162 ZNF407Q9C0G0 2248 aa21.09■□□□□ 0.97
PTPN4-207ENST00000460162 PDZD2O15018 2839 aa21.09■□□□□ 0.97
PTPN4-207ENST00000460162 A0A096LPK6 155 aa21.09■□□□□ 0.97
PTPN4-207ENST00000460162 PINLYPA6NC86 204 aa21.09■□□□□ 0.97
PTPN4-207ENST00000460162 H0YIV9 168 aa21.09■□□□□ 0.97
PTPN4-207ENST00000460162 BUD31P41223 144 aaPredicted RBP21.09■□□□□ 0.97
PTPN4-207ENST00000460162 PPIAP62937 165 aaKnown RBP21.09■□□□□ 0.97
PTPN4-207ENST00000460162 PCBP2Q15366 365 aaKnown RBP eCLIP21.09■□□□□ 0.97
PTPN4-207ENST00000460162 MPEG1Q2M385 716 aa21.09■□□□□ 0.97
PTPN4-207ENST00000460162 METTL2BQ6P1Q9 378 aaKnown RBP21.09■□□□□ 0.97
PTPN4-207ENST00000460162 GPR180Q86V85 440 aa21.09■□□□□ 0.97
PTPN4-207ENST00000460162 SLC22A16Q86VW1 577 aa21.09■□□□□ 0.97
PTPN4-207ENST00000460162 RNF175Q8N4F7 328 aa21.09■□□□□ 0.97
PTPN4-207ENST00000460162 TANKQ92844 425 aa21.09■□□□□ 0.97
PTPN4-207ENST00000460162 MTERF1Q99551 399 aaKnown RBP21.09■□□□□ 0.97
PTPN4-207ENST00000460162 FAM173AQ9BQD7 235 aa21.09■□□□□ 0.97
PTPN4-207ENST00000460162 TTTY12Q9BZ98 90 aa21.09■□□□□ 0.97
PTPN4-207ENST00000460162 ACSS3Q9H6R3 686 aa21.09■□□□□ 0.97
PTPN4-207ENST00000460162 TNPO3Q9Y5L0 923 aaKnown RBP21.09■□□□□ 0.97
PTPN4-207ENST00000460162 CSMD2Q7Z408 3487 aa21.08■□□□□ 0.97
PTPN4-207ENST00000460162 A0A0G2JMM0 328 aa21.08■□□□□ 0.97
PTPN4-207ENST00000460162 A0A1W2PPB8 328 aa21.08■□□□□ 0.97
PTPN4-207ENST00000460162 A0A1W2PRS3 328 aa21.08■□□□□ 0.97
PTPN4-207ENST00000460162 KIR3DP1A8MWS1 328 aa21.08■□□□□ 0.97
PTPN4-207ENST00000460162 ALDOAP04075 364 aaKnown RBP21.08■□□□□ 0.97
PTPN4-207ENST00000460162 IGKV3-11P04433 115 aa21.08■□□□□ 0.97
PTPN4-207ENST00000460162 ELAVL4P26378 380 aaKnown RBP21.08■□□□□ 0.97
PTPN4-207ENST00000460162 TLX1P31314 330 aaPredicted RBP21.08■□□□□ 0.97
PTPN4-207ENST00000460162 HNRNPH2P55795 449 aaKnown RBP21.08■□□□□ 0.97
PTPN4-207ENST00000460162 SLC7A5Q01650 507 aa21.08■□□□□ 0.97
PTPN4-207ENST00000460162 GTF2H2Q13888 395 aa21.08■□□□□ 0.97
PTPN4-207ENST00000460162 UAP1Q16222 522 aaPredicted RBP21.08■□□□□ 0.97
PTPN4-207ENST00000460162 TMEM211Q6ICI0 200 aa21.08■□□□□ 0.97
PTPN4-207ENST00000460162 GTF2H2CQ6P1K8 395 aa21.08■□□□□ 0.97
PTPN4-207ENST00000460162 CEP128Q6ZU80 1094 aa21.08■□□□□ 0.97
PTPN4-207ENST00000460162 SREK1Q8WXA9 508 aaKnown RBP21.08■□□□□ 0.97
PTPN4-207ENST00000460162 MRRFQ96E11 262 aaKnown RBP21.08■□□□□ 0.97
PTPN4-207ENST00000460162 FBXL20Q96IG2 436 aa21.08■□□□□ 0.97
PTPN4-207ENST00000460162 PELOQ9BRX2 385 aaKnown RBP21.08■□□□□ 0.97
PTPN4-207ENST00000460162 ZNF717Q9BY31 904 aaPredicted RBP21.08■□□□□ 0.97
PTPN4-207ENST00000460162 SACM1LQ9NTJ5 587 aa21.08■□□□□ 0.97
PTPN4-207ENST00000460162 RYDENQ9NUL5 291 aaKnown RBP21.08■□□□□ 0.97
PTPN4-207ENST00000460162 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.08■□□□□ 0.97
PTPN4-207ENST00000460162 LYARQ9NX58 379 aaKnown RBP21.08■□□□□ 0.97
PTPN4-207ENST00000460162 EML6Q6ZMW3 1958 aa21.08■□□□□ 0.96
PTPN4-207ENST00000460162 PHF3Q92576 2039 aaKnown RBP21.07■□□□□ 0.96
PTPN4-207ENST00000460162 DNAJC13O75165 2243 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 FAM166BA8MTA8 275 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 GLSO94925 669 aaPredicted RBP21.07■□□□□ 0.96
PTPN4-207ENST00000460162 CNR1P21554 472 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 PTX3P26022 381 aaPredicted RBP21.07■□□□□ 0.96
PTPN4-207ENST00000460162 TYK2P29597 1187 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 RPS13P62277 151 aaKnown RBP21.07■□□□□ 0.96
PTPN4-207ENST00000460162 FOLH1Q04609 750 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 CUL3Q13618 768 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 ZNF750Q32MQ0 723 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 GOLGA7Q7Z5G4 137 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 OR4N5Q8IXE1 308 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 C9orf40Q8IXQ3 194 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 ST13P4Q8IZP2 240 aaPredicted RBP21.07■□□□□ 0.96
PTPN4-207ENST00000460162 FAM109AQ8N4B1 249 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 MARVELD2Q8N4S9 558 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 SLC22A8Q8TCC7 542 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 RBM18Q96H35 190 aaKnown RBP21.07■□□□□ 0.96
PTPN4-207ENST00000460162 SENP5Q96HI0 755 aaPredicted RBP21.07■□□□□ 0.96
PTPN4-207ENST00000460162 LURAP1Q96LR2 239 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 SPOCK3Q9BQ16 436 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 LRRC1Q9BTT6 524 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 DEFB127Q9H1M4 99 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 IL1RL2Q9HB29 575 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 ATG4BQ9Y4P1 393 aa21.07■□□□□ 0.96
PTPN4-207ENST00000460162 A0A0A6YYD5 115 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 ZNF354AO60765 605 aaPredicted RBP21.06■□□□□ 0.96
PTPN4-207ENST00000460162 PDE9AO76083 593 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 ALOX15P16050 662 aaPredicted RBP21.06■□□□□ 0.96
PTPN4-207ENST00000460162 SSTR2P30874 369 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 KIR3DL1P43629 444 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 SPRED3Q2MJR0 410 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 TECRLQ5HYJ1 363 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 C18orf63Q68DL7 685 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 FAM47EQ6ZV65 393 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 NUDT13Q86X67 352 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 RELL1Q8IUW5 271 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 L3MBTL4Q8NA19 623 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms