RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 EIF3HO15372 352 aaKnown RBP eCLIP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 AKAP3O75969 853 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 NOL4O94818 638 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 MOCS3O95396 460 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 KRT7P08729 469 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 NUDT17P0C025 328 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 LINGO3P0C6S8 592 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 PNMA6AP0CW24 399 aaPredicted RBP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 NR2F1P10589 423 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 MCF2P10911 925 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 DARSP14868 501 aaKnown RBP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 CYP3A5P20815 502 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 MTHFRP42898 656 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 RPL21P46778 160 aaKnown RBP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 LMAN1P49257 510 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 LBX1P52954 281 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 MAPK12P53778 367 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 MAZP56270 477 aaKnown RBP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 PTENP60484 403 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 POLR2FP61218 127 aaKnown RBP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 ZNF33AQ06730 810 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 DRP2Q13474 957 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 PIGHQ14442 188 aaPredicted RBP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 UBE2SQ16763 222 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 SGSM1Q2NKQ1 1148 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 USH1GQ495M9 461 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 XKR6Q5GH73 641 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 BEND6Q5SZJ8 279 aaPredicted RBP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 SEL1L2Q5TEA6 688 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 SNRNP48Q6IEG0 339 aaKnown RBP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 TMEM207Q6UWW9 146 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 PPP1R21Q6ZMI0 780 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 LEKR1Q6ZMV7 388 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 BTN2A1Q7KYR7 527 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 PEX26Q7Z412 305 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 CAMKMTQ7Z624 323 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 UNC93AQ86WB7 457 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 PHF13Q86YI8 300 aaPredicted RBP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 SLC35F6Q8N357 371 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 MARVELD2Q8N4S9 558 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 LRRC52Q8N7C0 313 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 DBF4BQ8NFT6 615 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 PPTC7Q8NI37 304 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 ATP8B4Q8TF62 1192 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 SMAP2Q8WU79 429 aaPredicted RBP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 AZIN2Q96A70 460 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 CENPTQ96BT3 561 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 MAGED4Q96JG8 741 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 LINC00479Q96M42 142 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 ATOH8Q96SQ7 321 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 PARK7Q99497 189 aaKnown RBP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 SEPHS2Q99611 448 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 ADPGKQ9BRR6 497 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 MCRIP2Q9BUT9 160 aaKnown RBP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 CLEC7AQ9BXN2 247 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 FUT8Q9BYC5 575 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 LHX5Q9H2C1 402 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 ZNF302Q9NR11 478 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 ZDHHC18Q9NUE0 388 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 PARVAQ9NVD7 372 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 RAB20Q9NX57 234 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 RCOR3Q9P2K3 495 aaPredicted RBP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 ASIC3Q9UHC3 531 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 GRID1Q9ULK0 1009 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 WDR37Q9Y2I8 494 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 RNF215Q9Y6U7 377 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 PTPRFP10586 1907 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 RLFQ13129 1914 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 ZSWIM8A7E2V4 1837 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 ARID2Q68CP9 1835 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 SF3B1O75533 1304 aaKnown RBP eCLIP3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 NRCAMQ92823 1304 aa3.16□□□□□ -1.9
SSX2IP-204ENST00000459708 ADAMTSL1Q8N6G6 1762 aa3.15□□□□□ -1.9
SSX2IP-204ENST00000459708 A0A0J9YWU9 116 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 A0A1B0GUA9 196 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 A0A1W2PPQ1 181 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 TRIM49BA6NDI0 452 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 GLTPD2A6NH11 291 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 PP2D1A8MPX8 630 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 OGTO15294 1046 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 CLDN3O15551 220 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 SPRY1O43609 319 aaPredicted RBP3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 SHOX2O60902 331 aaPredicted RBP3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 HSF2BPO75031 334 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 GH1P01241 217 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 ABHD2P08910 425 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 GSTA2P09210 222 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 CLTAP09496 248 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 RAB40ALP0C0E4 278 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 STIP1P31948 543 aaKnown RBP3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 CTNNA1P35221 906 aaKnown RBP3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 PCK1P35558 622 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 ARL2P36404 184 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 OPRL1P41146 370 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 NSFP46459 744 aaKnown RBP3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 TAF6P49848 677 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 GMPSP49915 693 aaPredicted RBP3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 PRMT2P55345 433 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 STX17P56962 302 aa3.15□□□□□ -1.91
SSX2IP-204ENST00000459708 RWDD2BP57060 319 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms