RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 HYAL2Q12891 473 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 FADDQ13158 208 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 SLAMF1Q13291 335 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 NR1D2Q14995 579 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 NR0B2Q15466 257 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 CYP51A1Q16850 503 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 RABL3Q5HYI8 236 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 TCTE1Q5JU00 501 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 NDUFAF5Q5TEU4 345 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 PCSK4Q6UW60 755 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 ZNF621Q6ZSS3 439 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 VN1R4Q7Z5H5 301 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 SERPINA11Q86U17 422 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 IFNEQ86WN2 208 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 ZNF761Q86XN6 746 aaPredicted RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 KMT5CQ86Y97 462 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 TICAM1Q8IUC6 712 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 TMEM126BQ8IUX1 230 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 ZNF843Q8N446 348 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 CSNK1A1LQ8N752 337 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 FAM47BQ8NA70 645 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 HIPK4Q8NE63 616 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 OR4C6Q8NH72 309 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 GOT1L1Q8NHS2 421 aaPredicted RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 ADAMTS18Q8TE60 1221 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 OR5P2Q8WZ92 322 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 NAT6Q93015 286 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 TM4SF18Q96CE8 201 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 REXO5Q96IC2 774 aaKnown RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 NSMCE2Q96MF7 247 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 TRAPPC9Q96Q05 1148 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 TEFMQ96QE5 360 aaKnown RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 DPYSL5Q9BPU6 564 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 SORBS1Q9BX66 1292 aaKnown RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 NPLQ9BXD5 320 aaPredicted RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 YY1AP1Q9H869 796 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 CLK4Q9HAZ1 481 aaKnown RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 LYRM4Q9HD34 91 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 PDE7BQ9NP56 450 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 PRDM7Q9NQW5 492 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 ACSS1Q9NUB1 689 aaPredicted RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 UCKL1Q9NWZ5 548 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 SOHLH2Q9NX45 425 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 TAS2R9Q9NYW1 312 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 TAS2R7Q9NYW3 318 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 C6orf203Q9P0P8 240 aaPredicted RBP8.47□□□□□ -1.05
VPS50-207ENST00000458530 PRDM4Q9UKN5 801 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 KLHL20Q9Y2M5 609 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 PCDHGB2Q9Y5G2 931 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 SLC22A7Q9Y694 548 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 MGAQ8IWI9 3026 aa8.47□□□□□ -1.05
VPS50-207ENST00000458530 TCRBV3S1A0A5B6 114 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 ELOVL7A1L3X0 281 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 BLACEA4D250 179 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 TRABD2BA6NFA1 517 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 H0YGG7 62 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 ARPC2O15144 300 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 TMPRSS11DO60235 418 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 CTSVO60911 334 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 SCN2BO60939 215 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 BAG2O95816 211 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 FCGR1AP12314 374 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 ANPEPP15144 967 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 ST6GAL1P15907 406 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 HOXB9P17482 250 aaPredicted RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 ALOX12P18054 663 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 IL10P22301 178 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 UQCRC2P22695 453 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 CERS1P27544 350 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 ALDH4A1P30038 563 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 SOAT1P35610 550 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 CHI3L1P36222 383 aaPredicted RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 DUSP3P51452 185 aaPredicted RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 MANFP55145 182 aaKnown RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 POLE2P56282 527 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 WNT3P56703 355 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 VSX2P58304 361 aaPredicted RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 RAB8AP61006 207 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 ARF3P61204 181 aaPredicted RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 PHC1P78364 1004 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 BTN3A2P78410 334 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 MRPS22P82650 360 aaKnown RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 TXNL4AP83876 142 aaKnown RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 TNFRSF17Q02223 184 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 VAC14Q08AM6 782 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 SPIDRQ14159 915 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 MLC1Q15049 377 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 FXNQ16595 210 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 TUSC1Q2TAM9 212 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 C4orf48Q5BLP8 95 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 TMTC4Q5T4D3 741 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 GARNL3Q5VVW2 1013 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 OR52E8Q6IFG1 317 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 MRM1Q6IN84 353 aaKnown RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 ANKRD26P1Q6NSI1 321 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 FBXO42Q6P3S6 717 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 BHLHB9Q6PI77 547 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 UBE3DQ7Z6J8 389 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 SLC30A8Q8IWU4 369 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 SLC35F3Q8IY50 421 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms