RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CPN2P22792 545 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 PAFAH1B1P43034 410 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 STT3AP46977 705 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 NR0B1P51843 470 aaKnown RBP19.89■□□□□ 0.77
CPNE1-220ENST00000458038 OR4D1Q15615 310 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 ADNP2Q6IQ32 1131 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 MED27Q6P2C8 311 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 ZNF793Q6ZN11 406 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 LAS2Q8IYD9 372 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 SPATA6LQ8N4H0 392 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 ZNF321PQ8N8H1 164 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 TANKQ92844 425 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 ESAMQ96AP7 390 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 SENP5Q96HI0 755 aaPredicted RBP19.89■□□□□ 0.77
CPNE1-220ENST00000458038 DGAT2Q96PD7 388 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 KRT12Q99456 494 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 TRIM31Q9BZY9 425 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 CAB39LQ9H9S4 337 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 PRM3Q9NNZ6 103 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 FAM215AQ9Y5M1 114 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.89■□□□□ 0.77
CPNE1-220ENST00000458038 MYOCOSA0A1B0GUC4 107 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 ATP6AP2A0A1C7CYW4 349 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 EIF3HO15372 352 aaKnown RBP eCLIP19.88■□□□□ 0.777e-7■■□□□ 14.2
CPNE1-220ENST00000458038 ATP6AP2O75787 350 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 ETHE1O95571 254 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 CCL3P10147 92 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 TLX1P31314 330 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-220ENST00000458038 SSR2P43308 183 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 DNASE1L1P49184 302 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 ART1P52961 327 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 ARFIP1P53367 373 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 ZNF791Q3KP31 576 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-220ENST00000458038 STAG3L4Q8TBR4 150 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 PAQR8Q8TEZ7 354 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 RBBP8Q99708 897 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 CENPKQ9BS16 269 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 EXO5Q9H790 373 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 SMYD2Q9NRG4 433 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 TRMT1Q9NXH9 659 aaKnown RBP19.88■□□□□ 0.77
CPNE1-220ENST00000458038 QPCTLQ9NXS2 382 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 TUBA8Q9NY65 449 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-220ENST00000458038 CNIH4Q9P003 139 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 RNF14Q9UBS8 474 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 B4GALT7Q9UBV7 327 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 BOKQ9UMX3 212 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-220ENST00000458038 LIPGQ9Y5X9 500 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 SAR1BQ9Y6B6 198 aa19.88■□□□□ 0.77
CPNE1-220ENST00000458038 FREM3P0C091 2139 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 TRGV5A0A0B4J1U4 118 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 A0A0G2JNJ9 132 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 PHGDHO43175 533 aaKnown RBP19.87■□□□□ 0.77
CPNE1-220ENST00000458038 IGKV3-11P04433 115 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 GSTA2P09210 222 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 EPORP19235 508 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 GP5P40197 560 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 RPL21P46778 160 aaKnown RBP19.87■□□□□ 0.77
CPNE1-220ENST00000458038 RAB10P61026 200 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 PLIN5Q00G26 463 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 ASPHQ12797 758 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 ZKSCAN8Q15776 578 aaPredicted RBP19.87■□□□□ 0.77
CPNE1-220ENST00000458038 KRTAP21-3Q3LHN1 58 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 FBXO48Q5FWF7 155 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 C1orf185Q5T7R7 199 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 RIPPLY2Q5TAB7 128 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 DEPDC1Q5TB30 811 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 KHDRBS2Q5VWX1 349 aaKnown RBP19.87■□□□□ 0.77
CPNE1-220ENST00000458038 RTL6Q6ICC9 239 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 OR4C11Q6IEV9 310 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 OR7G3Q8NG95 312 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 RGMAQ96B86 450 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 FBXL20Q96IG2 436 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 PELOQ9BRX2 385 aaKnown RBP19.87■□□□□ 0.77
CPNE1-220ENST00000458038 RPF2Q9H7B2 306 aaKnown RBP19.87■□□□□ 0.77
CPNE1-220ENST00000458038 SH2D2AQ9NP31 389 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 Q9UFV3 132 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 PHF11Q9UIL8 331 aa19.87■□□□□ 0.77
CPNE1-220ENST00000458038 NAV3Q8IVL0 2385 aa19.86■□□□□ 0.77
CPNE1-220ENST00000458038 FAM221AA4D161 298 aa19.86■□□□□ 0.77
CPNE1-220ENST00000458038 ZNF354AO60765 605 aaPredicted RBP19.86■□□□□ 0.77
CPNE1-220ENST00000458038 TGFB1P01137 390 aa19.86■□□□□ 0.77
CPNE1-220ENST00000458038 SPRP35270 261 aaPredicted RBP19.86■□□□□ 0.77
CPNE1-220ENST00000458038 NINJ1Q92982 152 aa19.86■□□□□ 0.77
CPNE1-220ENST00000458038 SPACA9Q96E40 222 aaPredicted RBP19.86■□□□□ 0.77
CPNE1-220ENST00000458038 NMRAL1Q9HBL8 299 aa19.86■□□□□ 0.77
CPNE1-220ENST00000458038 ZFP64Q9NPA5 681 aa19.86■□□□□ 0.77
CPNE1-220ENST00000458038 ACKR4Q9NPB9 350 aa19.86■□□□□ 0.77
CPNE1-220ENST00000458038 NUDT4Q9NZJ9 180 aa19.86■□□□□ 0.77
CPNE1-220ENST00000458038 OPTCQ9UBM4 332 aa19.86■□□□□ 0.77
CPNE1-220ENST00000458038 EDARQ9UNE0 448 aa19.86■□□□□ 0.77
CPNE1-220ENST00000458038 TSC22D4Q9Y3Q8 395 aa19.86■□□□□ 0.77
CPNE1-220ENST00000458038 CXorf49A8MYA2 514 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-220ENST00000458038 K7EPI3 171 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 RTCAO00442 366 aaKnown RBP19.85■□□□□ 0.77
CPNE1-220ENST00000458038 FGF17O60258 216 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 PCNAP12004 261 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 SERPINB3P29508 390 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 SSTR1P30872 391 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 DNAJA1P31689 397 aaKnown RBP19.85■□□□□ 0.77
CPNE1-220ENST00000458038 PIK3CBP42338 1070 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms