RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 BCL9LQ86UU0 1499 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 M0R129 80 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 BRINP1O60477 761 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 STSP08842 583 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 TRAM2Q15035 370 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 FBXO43Q4G163 708 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 SFRP4Q6FHJ7 346 aaPredicted RBP18.86■□□□□ 0.61
SNX27-204ENST00000458013 REM2Q8IYK8 340 aaPredicted RBP18.86■□□□□ 0.61
SNX27-204ENST00000458013 ZNF709Q8N972 641 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 SACM1LQ9NTJ5 587 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 CLEC4EQ9ULY5 219 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 PEAK1Q9H792 1746 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 HAPLN1P10915 354 aaPredicted RBP18.86■□□□□ 0.61
SNX27-204ENST00000458013 HSD17B12Q53GQ0 312 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 RAET1LQ5VY80 246 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 FAM86B1Q8N7N1 296 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 SCGB1C1Q8TD33 95 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 RIT1Q92963 219 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 ZNF317Q96PQ6 595 aaPredicted RBP18.86■□□□□ 0.61
SNX27-204ENST00000458013 HDHD5Q9BXW7 423 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.86■□□□□ 0.61
SNX27-204ENST00000458013 PRELID1Q9Y255 219 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 OR1A2Q9Y585 309 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 BOLA2-SMG1P6H3BVE0 249 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 SRPRAP08240 638 aaKnown RBP18.86■□□□□ 0.61
SNX27-204ENST00000458013 DCDC5Q6ZRR9 648 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 NRROSQ86YC3 692 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 NELL2Q99435 816 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 EXOSC1Q9Y3B2 195 aaKnown RBP18.86■□□□□ 0.61
SNX27-204ENST00000458013 K7ERQ8 282 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 GALNT2Q10471 571 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 VMACQ2NL98 169 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 KIF18BQ86Y91 864 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.86■□□□□ 0.612e-11■□□□□ 8.7
SNX27-204ENST00000458013 TMEM246Q9BRR3 403 aa18.86■□□□□ 0.61
SNX27-204ENST00000458013 CRYZQ08257 329 aaKnown RBP18.85■□□□□ 0.61
SNX27-204ENST00000458013 DEFB134Q4QY38 66 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 ASRGL1Q7L266 308 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 TRMT10AQ8TBZ6 339 aaKnown RBP18.85■□□□□ 0.61
SNX27-204ENST00000458013 TREX2Q9BQ50 279 aaPredicted RBP18.85■□□□□ 0.61
SNX27-204ENST00000458013 EPHA6Q9UF33 1036 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 CD1DP15813 335 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 RPL19P84098 196 aaKnown RBP18.85■□□□□ 0.61
SNX27-204ENST00000458013 AADACL4Q5VUY2 407 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 ZNF584Q8IVC4 421 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 MGAT4BQ9UQ53 548 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 GOSR2O14653 212 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 TIGD4Q8IY51 512 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 ACTL8Q9H568 366 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 ATAD3CQ5T2N8 411 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 ZC3H14Q6PJT7 736 aaKnown RBP18.85■□□□□ 0.61
SNX27-204ENST00000458013 NPRL2Q8WTW4 380 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 GPR83Q9NYM4 423 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 SYNGR4O95473 234 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 CSTAP01040 98 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 ASGR2P07307 311 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 EPCAMP16422 314 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 AMY2BP19961 511 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 FBLP22087 321 aaKnown RBP18.85■□□□□ 0.61
SNX27-204ENST00000458013 ARSFP54793 590 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 ZNF630Q2M218 657 aaPredicted RBP18.85■□□□□ 0.61
SNX27-204ENST00000458013 PDSS1Q5T2R2 415 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 TREML1Q86YW5 311 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 ZNF384Q8TF68 577 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 TAS2R9Q9NYW1 312 aa18.85■□□□□ 0.61
SNX27-204ENST00000458013 TEX13CA0A0J9YWL9 993 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 PRSS51A0A1B0GVH4 220 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 ZNF14P17017 642 aaPredicted RBP18.84■□□□□ 0.61
SNX27-204ENST00000458013 PRKCAP17252 672 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 OR4D1Q15615 310 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 DCUN1D3Q8IWE4 304 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 PAAF1Q9BRP4 392 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 GPR34Q9UPC5 381 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 SLIT3O75094 1523 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 IGLON5A6NGN9 336 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 TRIM64CA6NLI5 447 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 PTGER1P34995 402 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 POU3F4P49335 361 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 TBPL1P62380 186 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 DEFB110Q30KQ9 67 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 PSAPL1Q6NUJ1 521 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 TMEM68Q96MH6 324 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 hCG_1807616A0A1W2PRN6 198 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 SLC19A2O60779 497 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 GALTP07902 379 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 SQSTM1Q13501 440 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 TSGA13Q96PP4 275 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 LMF1Q96S06 567 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 ZNF717Q9BY31 904 aaPredicted RBP18.84■□□□□ 0.61
SNX27-204ENST00000458013 ZBTB20Q9HC78 741 aaPredicted RBP18.84■□□□□ 0.61
SNX27-204ENST00000458013 INSL6Q9Y581 213 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 DNMT3AQ9Y6K1 912 aaPredicted RBP18.84■□□□□ 0.61
SNX27-204ENST00000458013 KIAA0513O60268 411 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 EPHA1P21709 976 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 DPY19L4Q7Z388 723 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 CLECL1Q8IZS7 167 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 Q8N402 240 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 OR52E2Q8NGJ4 325 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 C17orf50Q8WW18 174 aa18.84■□□□□ 0.61
SNX27-204ENST00000458013 RANBP3Q9H6Z4 567 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms