RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 SERINC2Q96SA4 455 aa8.23□□□□□ -1.09
RIF1-208ENST00000457745 DUSP23Q9BVJ7 150 aa8.23□□□□□ -1.09
RIF1-208ENST00000457745 ASPSCR1Q9BZE9 553 aa8.23□□□□□ -1.09
RIF1-208ENST00000457745 RPF2Q9H7B2 306 aaKnown RBP8.23□□□□□ -1.09
RIF1-208ENST00000457745 KAT8Q9H7Z6 458 aaKnown RBP8.23□□□□□ -1.09
RIF1-208ENST00000457745 SPAG4Q9NPE6 437 aa8.23□□□□□ -1.09
RIF1-208ENST00000457745 TOR4AQ9NXH8 423 aa8.23□□□□□ -1.09
RIF1-208ENST00000457745 AHSPQ9NZD4 102 aa8.23□□□□□ -1.09
RIF1-208ENST00000457745 DHCR7Q9UBM7 475 aaKnown RBP8.23□□□□□ -1.09
RIF1-208ENST00000457745 SUCOQ9UBS9 1254 aaKnown RBP8.23□□□□□ -1.09
RIF1-208ENST00000457745 UTS2RQ9UKP6 389 aa8.23□□□□□ -1.09
RIF1-208ENST00000457745 PCDHGA5Q9Y5G8 931 aa8.23□□□□□ -1.09
RIF1-208ENST00000457745 SLC22A7Q9Y694 548 aa8.23□□□□□ -1.09
RIF1-208ENST00000457745 MAU2Q9Y6X3 613 aa8.23□□□□□ -1.09
RIF1-208ENST00000457745 MUC6Q6W4X9 2439 aa8.23□□□□□ -1.09
RIF1-208ENST00000457745 A0A1W2PRB8 838 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 DYTNA2CJ06 578 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 HYKKA2RU49 373 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 MYO1GB0I1T2 1018 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 D6RAR5 112 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 YKT6O15498 198 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 PDPK1O15530 556 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 LDB3O75112 727 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 CNOT3O75175 753 aaKnown RBP8.22□□□□□ -1.09
RIF1-208ENST00000457745 ERAL1O75616 437 aaKnown RBP8.22□□□□□ -1.09
RIF1-208ENST00000457745 BCAS2O75934 225 aaPredicted RBP8.22□□□□□ -1.09
RIF1-208ENST00000457745 SYPP08247 313 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 CT62P0C5K7 136 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 ZNF806P0C7X5 589 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 ZNF883P0CG24 379 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 NR2F6P10588 404 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 CCL4P13236 92 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 ETFAP13804 333 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 HSD17B1P14061 328 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 PNLIPP16233 465 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 CPN2P22792 545 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 OR1D4P47884 311 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 TRPC1P48995 793 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 TRA2BP62995 288 aaKnown RBP8.22□□□□□ -1.09
RIF1-208ENST00000457745 BTG2P78543 158 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 HSD11B2P80365 405 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 DAB2P98082 770 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 MGAT2Q10469 447 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 SLC9A5Q14940 896 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 TUSC1Q2TAM9 212 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 C1orf189Q5VU69 101 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 C1orf146Q5VVC0 180 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 KLHL35Q6PF15 583 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 FAM111BQ6SJ93 734 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 ZNF621Q6ZSS3 439 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 MSANTD1Q6ZTZ1 278 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 PAGE2Q7Z2X7 111 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 WDR53Q7Z5U6 358 aaPredicted RBP8.22□□□□□ -1.09
RIF1-208ENST00000457745 MARCH9Q86YJ5 346 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 LILRA2Q8N149 483 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 TBC1D19Q8N5T2 526 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 ADCY4Q8NFM4 1077 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 OR8J3Q8NGG0 315 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 OR10Q1Q8NGQ4 319 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 OR9A2Q8NGT5 310 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 PYDC1Q8WXC3 89 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 KAT2AQ92830 837 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 MAL2Q969L2 176 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 ZNF775Q96BV0 537 aaPredicted RBP8.22□□□□□ -1.09
RIF1-208ENST00000457745 MTERF3Q96E29 417 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 ZDHHC12Q96GR4 267 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 ZNF764Q96H86 408 aaPredicted RBP8.22□□□□□ -1.09
RIF1-208ENST00000457745 PEX11GQ96HA9 241 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 PANX1Q96RD7 426 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 CD180Q99467 661 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 CTRCQ99895 268 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 HOPXQ9BPY8 73 aaPredicted RBP8.22□□□□□ -1.09
RIF1-208ENST00000457745 EDEM2Q9BV94 578 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 CHRNA10Q9GZZ6 450 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 AKIRIN1Q9H9L7 192 aaPredicted RBP8.22□□□□□ -1.09
RIF1-208ENST00000457745 PDE7BQ9NP56 450 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 SLC35C2Q9NQQ7 365 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 SEMA4GQ9NTN9 838 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 GID8Q9NWU2 228 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 VPS4AQ9UN37 437 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 KCNE3Q9Y6H6 103 aa8.22□□□□□ -1.09
RIF1-208ENST00000457745 PCSK5Q92824 1860 aa8.21□□□□□ -1.09
RIF1-208ENST00000457745 C4orf47A7E2U8 309 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 FAM220BPB1ANY3 271 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 H0YHG0 523 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 HRKO00198 91 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 CLIC1O00299 241 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 B3GALT2O43825 422 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 ERN1O75460 977 aaKnown RBP8.21□□□□□ -1.1
RIF1-208ENST00000457745 TNFRSF21O75509 655 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 CDC123O75794 336 aaPredicted RBP8.21□□□□□ -1.1
RIF1-208ENST00000457745 OR2B3O76000 313 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 KCNK5O95279 499 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 PSMG1O95456 288 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 CPNE6O95741 557 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 LDOC1O95751 146 aaPredicted RBP8.21□□□□□ -1.1
RIF1-208ENST00000457745 MT-ND1P03886 318 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 NTRK1P04629 796 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 RETP07949 1114 aa8.21□□□□□ -1.1
RIF1-208ENST00000457745 ZCCHC18P0CG32 403 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms