RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 MPEG1Q2M385 716 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 ZNF793Q6ZN11 406 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 ANKRD46Q86W74 232 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 ZNF595Q8IYB9 648 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 CLECL1Q8IZS7 167 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 LGI4Q8N135 537 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 ARHGEF39Q8N4T4 335 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 LINC00471Q8N535 108 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 CSNK1A1LQ8N752 337 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 OR5K1Q8NHB7 308 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 CDC26Q8NHZ8 85 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 BBS10Q8TAM1 723 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 FIG4Q92562 907 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 NAT6Q93015 286 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 GFM2Q969S9 779 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 AURKBQ96GD4 344 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 ZNF681Q96N22 645 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 RBM4BQ9BQ04 359 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 RBM4Q9BWF3 364 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 POLR2J2Q9GZM3 115 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 POLR2J3Q9H1A7 115 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 IKZF5Q9H5V7 419 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 ANKHQ9HCJ1 492 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 PDE7BQ9NP56 450 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 C2orf42Q9NWW7 574 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 P2RX2Q9UBL9 471 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 AURKCQ9UQB9 309 aa6.47□□□□□ -1.37
ECHDC1-210ENST00000454859 A0A0G2JPF8 293 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 A0A1W2PR48 441 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 WASHC1A8K0Z3 465 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 HNRNPCL2B2RXH8 293 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 HNRNPCL3B7ZW38 293 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 ADAMDEC1O15204 470 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 CTSVO60911 334 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 SERPINB7O75635 380 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 NSA2O95478 260 aaKnown RBP6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 AIFM1O95831 613 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 ATP1B1P05026 303 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 HNRNPCL4P0DMR1 293 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 CDH2P19022 906 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 DUSP3P51452 185 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 PLA2G16P53816 162 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 BTN3A2P78410 334 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 KCNC4Q03721 635 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 GRM7Q14831 915 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 ZDHHC13Q8IUH4 622 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 MCATQ8IVS2 390 aaKnown RBP6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 LRRC25Q8N386 305 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 TTC29Q8NA56 475 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 GEMIN6Q8WXD5 167 aaKnown RBP6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 LRTOMTQ8WZ04 291 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC35B4Q969S0 331 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 EPYCQ99645 322 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 TRIM4Q9C037 500 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 AICDAQ9GZX7 198 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 TCEAL2Q9H3H9 227 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 IL21RQ9HBE5 538 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC6A13Q9NSD5 602 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 SIRT3Q9NTG7 399 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 PCDHGB2Q9Y5G2 931 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 HSPE1-MOB4S4R3N1 261 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 TDRD6O60522 2096 aaKnown RBP6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 VCANP13611 3396 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 SPAG17Q6Q759 2223 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 CACNA1EQ15878 2313 aa6.46□□□□□ -1.38
ECHDC1-210ENST00000454859 A0A1B0GTQ1 180 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 B4DGG1 531 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 SAP18O00422 153 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 SYT5O00445 386 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 CASC3O15234 703 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 PPM1DO15297 605 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 PCDHGA12O60330 932 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 PLOD3O60568 738 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 CER1O95813 267 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 SERPINA1P01009 418 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 SERPIND1P05546 499 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 SYPP08247 313 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF888P0CJ79 500 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 RNH1P13489 461 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 CPN2P22792 545 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 MSX2P35548 267 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 ALDH3A2P51648 485 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 ARSFP54793 590 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 LIM2P55344 173 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 ITGA1P56199 1179 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 IGLV3-21P80748 117 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 GAB1Q13480 694 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 SCARB2Q14108 478 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 SPDYE7PQ495Y7 208 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 IFI44LQ53G44 452 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 TMEM31Q5JXX7 168 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 SHQ1Q6PI26 577 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 KANSL1Q7Z3B3 1105 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 C6orf120Q7Z4R8 191 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 C1orf210Q8IVY1 113 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 FAM160A2Q8N612 972 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 TOR1AIP2Q8NFQ8 470 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 OR4C6Q8NH72 309 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC35G5Q96KT7 338 aa6.45□□□□□ -1.38
ECHDC1-210ENST00000454859 C10orf90Q96M02 699 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms