RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 ETV3P41162 512 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 BDKRB1P46663 353 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 CTSCP53634 463 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 DSTNP60981 165 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 TRA2BP62995 288 aaKnown RBP10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 HBA1P69905 142 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 C2orf80Q0P641 193 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 SLBPQ14493 270 aaKnown RBP eCLIP10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 TEAD2Q15562 447 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 ARSIQ5FYB1 569 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 TMEM201Q5SNT2 666 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 REEP3Q6NUK4 255 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 PRR23CQ6ZRP0 262 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 KRT73Q86Y46 540 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 TMIEQ8NEW7 156 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 ZNF675Q8TD23 568 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 OR5P2Q8WZ92 322 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 NR4A3Q92570 626 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 GGHQ92820 318 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 RAD51AP1Q96B01 352 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 PDXPQ96GD0 296 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 RHBGQ9H310 441 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 LMAN1LQ9HAT1 526 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 A4GALTQ9NPC4 353 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 CLN6Q9NWW5 311 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 TRNAU1APQ9NX07 287 aaKnown RBP10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 MBD1Q9UIS9 605 aaPredicted RBP10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 CFL2Q9Y281 166 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 SLC27A6Q9Y2P4 619 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 PCDHGA3Q9Y5H0 932 aa10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 DNMT3AQ9Y6K1 912 aaPredicted RBP10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 NUP214P35658 2090 aaPredicted RBP10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 CNOT1A5YKK6 2376 aaKnown RBP10.08□□□□□ -0.8
GTF3C2-206ENST00000454704 A0A075B6Q4 140 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 IRGMA1A4Y4 181 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 TMEM247A6NEH6 219 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 AGAP5A6NIR3 686 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 ZAR1LA6NP61 321 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 LOC110117498-PIK3R3F6TDL0 507 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 BOLA2-SMG1P6H3BVE0 249 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 MTX2O75431 263 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 GCM2O75603 506 aaPredicted RBP10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 DIRAS1O95057 198 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 C6orf47O95873 294 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 ITGB7P26010 798 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 ANXA11P50995 505 aaKnown RBP10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 CDH12P55289 794 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 DEFA1P59665 94 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 DEFA3P59666 94 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 NCS1P62166 190 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 SNRPGP62308 76 aaKnown RBP10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 RHAGQ02094 409 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 SEMG2Q02383 582 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 SPEM2Q0P670 501 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 CNTN1Q12860 1018 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 DGCR6Q14129 220 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 MLC1Q15049 377 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 NDUFA9Q16795 377 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 EXOC3L2Q2M3D2 409 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 ZNF385BQ569K4 471 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 COLEC12Q5KU26 742 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 C19orf48Q6RUI8 117 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 TSEN54Q7Z6J9 526 aaKnown RBP10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 LRRC56Q8IYG6 542 aaPredicted RBP10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 SLC5A8Q8N695 610 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 FAM46DQ8NEK8 389 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 OR10Q1Q8NGQ4 319 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 OR2L2Q8NH16 312 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 NFKBIDQ8NI38 313 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 PIK3R3Q92569 461 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 RSPRY1Q96DX4 576 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 NEURL3Q96EH8 262 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 DHRS1Q96LJ7 313 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 IER2Q9BTL4 223 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 TRIM39Q9HCM9 518 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 MIEF1Q9NQG6 463 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 RASSF1Q9NS23 344 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 SCHIP1Q9P0W5 487 aaPredicted RBP10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 ANKMY1Q9P2S6 941 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 CRNNQ9UBG3 495 aaPredicted RBP10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 FAM8A1Q9UBU6 413 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 ADAM29Q9UKF5 820 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 RAB23Q9ULC3 237 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 TMCC3Q9ULS5 477 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 EXO1Q9UQ84 846 aaKnown RBP10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 ERVK-11Q9UQG0 969 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 TESMINQ9Y4I5 508 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 PMF1-BGLAPU3KQ54 211 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 HEPACAM2A8MVW5 462 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 C5orf58C9J3I9 102 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 M0R082 166 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 FAAHO00519 579 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 HOXC11O43248 304 aaPredicted RBP10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 SLITRK5O94991 958 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 LCKP06239 509 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 NUDT7P0C024 238 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 ADORA3P0DMS8 318 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 ERGP11308 486 aa10.07□□□□□ -0.8
GTF3C2-206ENST00000454704 ETFAP13804 333 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms