RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 RORAP35398 523 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 RAB38P57729 211 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 IL11RAQ14626 422 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 C3orf38Q5JPI3 329 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 CPTPQ5TA50 214 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 FAM69BQ5VUD6 431 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 SLC48A1Q6P1K1 146 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 DLEU7Q6UYE1 221 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 IKBIPQ70UQ0 350 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 CAMKMTQ7Z624 323 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 MSRB3Q8IXL7 192 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 GLB1L3Q8NCI6 653 aaPredicted RBP10.34□□□□□ -0.75
SCN9A-205ENST00000454569 RBM15BQ8NDT2 890 aaKnown RBP10.34□□□□□ -0.75
SCN9A-205ENST00000454569 OR8J2Q8NGG1 315 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 ANKRD9Q96BM1 317 aaPredicted RBP10.34□□□□□ -0.75
SCN9A-205ENST00000454569 PPCDCQ96CD2 204 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 KLHL29Q96CT2 875 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 CLIP3Q96DZ5 547 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 CMTM5Q96DZ9 223 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 ZNF681Q96N22 645 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 CMKLR1Q99788 373 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 SLC25A23Q9BV35 468 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 DUSP26Q9BV47 211 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 NPLQ9BXD5 320 aaPredicted RBP10.34□□□□□ -0.75
SCN9A-205ENST00000454569 ROGDIQ9GZN7 287 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 ZNF304Q9HCX3 659 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 PACSIN3Q9UKS6 424 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 SATB2Q9UPW6 733 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 ASPMQ8IZT6 3477 aa10.34□□□□□ -0.75
SCN9A-205ENST00000454569 C1orf226A1L170 272 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 B4E171 279 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 H0YIG0 161 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 MRASO14807 208 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 TBX19O60806 448 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 B4GALT2O60909 372 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 ERAL1O75616 437 aaKnown RBP10.33□□□□□ -0.76
SCN9A-205ENST00000454569 CPSF4O95639 269 aaKnown RBP10.33□□□□□ -0.76
SCN9A-205ENST00000454569 IL6P05231 212 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 NR2F6P10588 404 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 DRD2P14416 443 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 HOXB9P17482 250 aaPredicted RBP10.33□□□□□ -0.76
SCN9A-205ENST00000454569 HPCAL1P37235 193 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 FEN1P39748 380 aaKnown RBP10.33□□□□□ -0.76
SCN9A-205ENST00000454569 TSPAN7P41732 249 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 KIR3DL1P43629 444 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 XCR1P46094 333 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 AVPR1BP47901 424 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 CLNS1AP54105 237 aaKnown RBP10.33□□□□□ -0.76
SCN9A-205ENST00000454569 ARSFP54793 590 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 PCBP4P57723 403 aaKnown RBP10.33□□□□□ -0.76
SCN9A-205ENST00000454569 SRSF11Q05519 484 aaKnown RBP10.33□□□□□ -0.76
SCN9A-205ENST00000454569 CAPRIN1Q14444 709 aaKnown RBP10.33□□□□□ -0.76
SCN9A-205ENST00000454569 HEPACAMQ14CZ8 416 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.33□□□□□ -0.76
SCN9A-205ENST00000454569 DGAT2L6Q6ZPD8 337 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 SHISA6Q6ZSJ9 500 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 ZNF551Q7Z340 670 aaPredicted RBP10.33□□□□□ -0.76
SCN9A-205ENST00000454569 TIPARPQ7Z3E1 657 aaKnown RBP10.33□□□□□ -0.76
SCN9A-205ENST00000454569 KIF2BQ8N4N8 673 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 SIMC1Q8NDZ2 872 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 SUN3Q8TAQ9 357 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 COL26A1Q96A83 441 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 DEPDC7Q96QD5 511 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 ZBTB18Q99592 522 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 RTKNQ9BST9 563 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 YIPF2Q9BWQ6 316 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 SPRY4Q9C004 299 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 PAIP1Q9H074 479 aaKnown RBP10.33□□□□□ -0.76
SCN9A-205ENST00000454569 RPF2Q9H7B2 306 aaKnown RBP10.33□□□□□ -0.76
SCN9A-205ENST00000454569 MIEF1Q9NQG6 463 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 LANCL2Q9NS86 450 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 SLC25A37Q9NYZ2 338 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 FOXJ2Q9P0K8 574 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 CTSFQ9UBX1 484 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 UTS2RQ9UKP6 389 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 NDUFAF1Q9Y375 327 aa10.33□□□□□ -0.76
SCN9A-205ENST00000454569 A0A088AWK7 358 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 CCDC187A0A096LP49 1063 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 PLD2O14939 933 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 SORBS2O94875 1100 aaKnown RBP10.32□□□□□ -0.76
SCN9A-205ENST00000454569 C6orf47O95873 294 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 MAOAP21397 527 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 ZNF10P21506 573 aaPredicted RBP10.32□□□□□ -0.76
SCN9A-205ENST00000454569 PPP2R1BP30154 601 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 FRKP42685 505 aaPredicted RBP10.32□□□□□ -0.76
SCN9A-205ENST00000454569 NUDT2P50583 147 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 IRX1P78414 480 aaPredicted RBP10.32□□□□□ -0.76
SCN9A-205ENST00000454569 FOLH1Q04609 750 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 SELPLGQ14242 412 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 LTB4RQ15722 352 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 C8orf82Q6P1X6 216 aaPredicted RBP10.32□□□□□ -0.76
SCN9A-205ENST00000454569 DNAJC14Q6Y2X3 702 aaPredicted RBP10.32□□□□□ -0.76
SCN9A-205ENST00000454569 ZC3H7AQ8IWR0 971 aaKnown RBP10.32□□□□□ -0.76
SCN9A-205ENST00000454569 PRSS58Q8IYP2 241 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 CCDC116Q8IYX3 515 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 DSELQ8IZU8 1212 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 C10orf111Q8N326 155 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 MTERF3Q96E29 417 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 AURKBQ96GD4 344 aaPredicted RBP10.32□□□□□ -0.76
SCN9A-205ENST00000454569 STRADBQ9C0K7 418 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms