RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 NEURL3Q96EH8 262 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 ZNF300Q96RE9 604 aaPredicted RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 TCEAL2Q9H3H9 227 aaPredicted RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 NT5DC2Q9H857 520 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 NEUROD4Q9HD90 331 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 AMBNQ9NP70 447 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 SLC35C2Q9NQQ7 365 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 APOBEC3BQ9UH17 382 aaKnown RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 BLOC1S6Q9UL45 172 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 SCML1Q9UN30 329 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 CYP8B1Q9UNU6 501 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 FAM227AF5H4B4 570 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 PCDH17O14917 1159 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 ADAMDEC1O15204 470 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 PRICKLE3O43900 615 aaPredicted RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 ABCB7O75027 752 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 JRKO75564 520 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 IFNA14P01570 189 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 EIF2S1P05198 315 aaKnown RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 HTR1AP08908 422 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 ATXN8OSP0DMR3 200 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 SRP54P61011 504 aaKnown RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 SAXO2Q658L1 398 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 ABHD17CQ6PCB6 329 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 USP30Q70CQ3 517 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 LGI4Q8N135 537 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 TBC1D19Q8N5T2 526 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 ADAMTS16Q8TE57 1224 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 COL26A1Q96A83 441 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 FAIM2Q9BWQ8 316 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 LHPPQ9H008 270 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 C6orf106Q9H6K1 298 aaPredicted RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 EPS8L2Q9H6S3 715 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 FBRSQ9HAH7 460 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 SPEGQ15772 3267 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 TRIOBPQ9H2D6 2365 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 TDRD6O60522 2096 aaKnown RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 PRR19A6NJB7 356 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 HMGN4O00479 90 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 ATE1O95260 518 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 ATP5A1P25705 553 aaKnown RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 IDH2P48735 452 aaKnown RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 MRPS21P82921 87 aaKnown RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 SKIV2LQ15477 1246 aaKnown RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 CCDC85BQ15834 202 aaPredicted RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 ALG11Q2TAA5 492 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 TDHQ8IZJ6 230 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 TAGAPQ8N103 731 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 OR2L5Q8NG80 312 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 OR13H1Q8NG92 308 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 UTP15Q8TED0 518 aaKnown RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 DOK4Q8TEW6 326 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 ZFAND2BQ8WV99 257 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 RLN3Q8WXF3 142 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 FAM3CQ92520 227 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 FAM131CQ96AQ9 280 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 AMDHD1Q96NU7 426 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 COL21A1Q96P44 957 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 NODALQ96S42 347 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 EPYCQ99645 322 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 APOL4Q9BPW4 351 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 NIPSNAP1Q9BPW8 284 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 GABARAPL1Q9H0R8 117 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 OR51I1Q9H343 314 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 PRDM7Q9NQW5 492 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 PCDHGA4Q9Y5G9 962 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 HEBP2Q9Y5Z4 205 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 LAMA1P25391 3075 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 OR6C74A6NCV1 312 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 TPST2O60704 377 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 KCNJ13O60928 360 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 SEMA4FO95754 770 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 AIFM1O95831 613 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 NR2F1P10589 423 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 ITGAMP11215 1152 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 NTSP30990 170 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 DUSP2Q05923 314 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 LASP1Q14847 261 aaKnown RBP11.15□□□□□ -0.62
VTA1-203ENST00000452973 EOGTQ5NDL2 527 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 XAF1Q6GPH4 301 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 LAIR1Q6GTX8 287 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 TMEM107Q6UX40 140 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 DEF8Q6ZN54 512 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 WDR53Q7Z5U6 358 aaPredicted RBP11.15□□□□□ -0.62
VTA1-203ENST00000452973 B3GNT8Q7Z7M8 397 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 RBM45Q8IUH3 476 aaKnown RBP11.15□□□□□ -0.62
VTA1-203ENST00000452973 DEFB119Q8N690 84 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 ZNF540Q8NDQ6 660 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 SETD9Q8NE22 299 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 PHF10Q8WUB8 498 aaKnown RBP11.15□□□□□ -0.62
VTA1-203ENST00000452973 GEMIN6Q8WXD5 167 aaKnown RBP11.15□□□□□ -0.62
VTA1-203ENST00000452973 NECTIN4Q96NY8 510 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 PITHD1Q9GZP4 211 aaPredicted RBP11.15□□□□□ -0.62
VTA1-203ENST00000452973 SERHL2Q9H4I8 314 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 KIR3DX1Q9H7L2 352 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 ERVK-18Q9QC07 812 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 GMEB1Q9Y692 573 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 AP1M2Q9Y6Q5 423 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 A0A1W2PPW3 197 aa11.15□□□□□ -0.62
VTA1-203ENST00000452973 M0R129 80 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms