RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 IL1RAPQ9NPH3 570 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 MAT2BQ9NZL9 334 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 SLC6A14Q9UN76 642 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 SH2B3Q9UQQ2 575 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 HS3ST2Q9Y278 367 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 GPC6Q9Y625 555 aaPredicted RBP10.66□□□□□ -0.7
DDR1-239ENST00000452441 TAF4O00268 1085 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 YY2O15391 372 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 PI15O43692 258 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 ADRB3P13945 408 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 CD22P20273 847 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 IMPA1P29218 277 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 MRPL19P49406 292 aaKnown RBP10.66□□□□□ -0.7
DDR1-239ENST00000452441 UGT2B15P54855 530 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 KIAA0040Q15053 153 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 DUSP7Q16829 419 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 CRB2Q5IJ48 1285 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 TANGO2Q6ICL3 276 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 TMEM53Q6P2H8 277 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 ADGRD2Q7Z7M1 963 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 CPXM2Q8N436 756 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 TRAM1L1Q8N609 369 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 METTL27Q8N6F8 245 aaPredicted RBP10.66□□□□□ -0.7
DDR1-239ENST00000452441 FAM83FQ8NEG4 500 aaPredicted RBP10.66□□□□□ -0.7
DDR1-239ENST00000452441 SLC5A11Q8WWX8 675 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 RLN3Q8WXF3 142 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 TSACCQ96A04 125 aaPredicted RBP10.66□□□□□ -0.7
DDR1-239ENST00000452441 DIRAS2Q96HU8 199 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 HDHD2Q9H0R4 259 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 SPNS1Q9H2V7 528 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 PCDHGA10Q9Y5H3 936 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 SVILO95425 2214 aa10.66□□□□□ -0.7
DDR1-239ENST00000452441 ANKRD36A6QL64 1941 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 EDDM13A0A1B0GTR0 161 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 AQP9O43315 295 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 COQ9O75208 318 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 KRT75O95678 551 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 LATS1O95835 1130 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 TIA1P31483 386 aaKnown RBP eCLIP10.65□□□□□ -0.7
DDR1-239ENST00000452441 GPR68Q15743 365 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 NNATQ16517 81 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 C5orf22Q49AR2 442 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 FAM78AQ5JUQ0 283 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 FBXO46Q6PJ61 603 aaPredicted RBP10.65□□□□□ -0.7
DDR1-239ENST00000452441 OR8K5Q8NH50 307 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 SIPA1Q96FS4 1042 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 DOHHQ9BU89 302 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 ITPAQ9BY32 194 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 TRIT1Q9H3H1 467 aaKnown RBP10.65□□□□□ -0.7
DDR1-239ENST00000452441 AKIP1Q9NQ31 210 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 GTF2A1LQ9UNN4 478 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 ENTPD4Q9Y227 616 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 NCKAP1Q9Y2A7 1128 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 IRAK3Q9Y616 596 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 HTR3EA5X5Y0 456 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 CACNB4O00305 520 aaPredicted RBP10.65□□□□□ -0.7
DDR1-239ENST00000452441 NDUFS4O43181 175 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 FZD6O60353 706 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 GABARAPO95166 117 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 FGF19O95750 216 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 RPS3P23396 243 aaKnown RBP eCLIP10.65□□□□□ -0.74e-7■■■□□ 18.1
DDR1-239ENST00000452441 HOXD12P35452 270 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 LIPAP38571 399 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 CENPAP49450 140 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 ELAVL3Q14576 367 aaKnown RBP10.65□□□□□ -0.7
DDR1-239ENST00000452441 NCF4Q15080 339 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 INAVAQ3KP66 663 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 ZNF404Q494X3 552 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 ZNF385BQ569K4 471 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 TMEM215Q68D42 235 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 ERICH5Q6P6B1 374 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 LRRTM4Q86VH4 590 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 PHF21AQ96BD5 680 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 OR5M11Q96RB7 305 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 CENPOQ9BU64 300 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 REEP4Q9H6H4 257 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 OR51B4Q9Y5P0 310 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 SCAMP2O15127 329 aaKnown RBP10.65□□□□□ -0.7
DDR1-239ENST00000452441 JRKO75564 520 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 HOXB2P14652 356 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 IDSP22304 550 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 AK4P27144 223 aaPredicted RBP10.65□□□□□ -0.7
DDR1-239ENST00000452441 KCNC4Q03721 635 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 LRRC32Q14392 662 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 IQCCQ4KMZ1 466 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 CRTC2Q53ET0 693 aaPredicted RBP10.65□□□□□ -0.7
DDR1-239ENST00000452441 MPP7Q5T2T1 576 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 ZC3H14Q6PJT7 736 aaKnown RBP10.65□□□□□ -0.7
DDR1-239ENST00000452441 ZNF730Q6ZMV8 503 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 ADIPOR2Q86V24 386 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 OOSP2Q86WS3 158 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 ALG14Q96F25 216 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 GAL3ST1Q99999 423 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 TMED9Q9BVK6 235 aa10.65□□□□□ -0.7
DDR1-239ENST00000452441 ZNF282Q9UDV7 671 aaPredicted RBP10.65□□□□□ -0.7
DDR1-239ENST00000452441 VWA8A3KMH1 1905 aa10.65□□□□□ -0.71
DDR1-239ENST00000452441 LINC01553A4QN01 128 aa10.64□□□□□ -0.71
DDR1-239ENST00000452441 H7C0S8 307 aa10.64□□□□□ -0.71
DDR1-239ENST00000452441 GAPDHSO14556 408 aaPredicted RBP10.64□□□□□ -0.71
DDR1-239ENST00000452441 CASKO14936 926 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms