RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 SMU1Q2TAY7 513 aa22.57■■□□□ 1.2
CPSF4-207ENST00000451876 FAM71E1Q6IPT2 247 aa22.57■■□□□ 1.2
CPSF4-207ENST00000451876 OGFOD2Q6N063 350 aa22.57■■□□□ 1.2
CPSF4-207ENST00000451876 FAM180BQ6P0A1 224 aa22.57■■□□□ 1.2
CPSF4-207ENST00000451876 ANKRD37Q7Z713 158 aa22.57■■□□□ 1.2
CPSF4-207ENST00000451876 AMER2Q8N7J2 671 aa22.57■■□□□ 1.2
CPSF4-207ENST00000451876 METTL21AQ8WXB1 218 aa22.57■■□□□ 1.2
CPSF4-207ENST00000451876 TANKQ92844 425 aa22.57■■□□□ 1.2
CPSF4-207ENST00000451876 GFM2Q969S9 779 aaKnown RBP22.57■■□□□ 1.2
CPSF4-207ENST00000451876 FAIM2Q9BWQ8 316 aa22.57■■□□□ 1.2
CPSF4-207ENST00000451876 NOP53Q9NZM5 478 aaKnown RBP22.57■■□□□ 1.2
CPSF4-207ENST00000451876 CES1P1Q9UKY3 287 aa22.57■■□□□ 1.2
CPSF4-207ENST00000451876 PKD1L2Q7Z442 2459 aa22.56■■□□□ 1.2
CPSF4-207ENST00000451876 TGDSO95455 350 aa22.56■■□□□ 1.2
CPSF4-207ENST00000451876 G6PDP11413 515 aa22.56■■□□□ 1.2
CPSF4-207ENST00000451876 MAPK1P28482 360 aa22.56■■□□□ 1.2
CPSF4-207ENST00000451876 GSTM5P46439 218 aa22.56■■□□□ 1.2
CPSF4-207ENST00000451876 IDH3AP50213 366 aa22.56■■□□□ 1.2
CPSF4-207ENST00000451876 EEF1A2Q05639 463 aaKnown RBP22.56■■□□□ 1.2
CPSF4-207ENST00000451876 C2orf80Q0P641 193 aa22.56■■□□□ 1.2
CPSF4-207ENST00000451876 MAD2L1Q13257 205 aaPredicted RBP22.56■■□□□ 1.2
CPSF4-207ENST00000451876 SLC48A1Q6P1K1 146 aa22.56■■□□□ 1.2
CPSF4-207ENST00000451876 ZSCAN1Q8NBB4 408 aa22.56■■□□□ 1.2
CPSF4-207ENST00000451876 OR11G2Q8NGC1 345 aa22.56■■□□□ 1.2
CPSF4-207ENST00000451876 P4HTMQ9NXG6 502 aa22.56■■□□□ 1.2
CPSF4-207ENST00000451876 DCTN4Q9UJW0 460 aa22.56■■□□□ 1.2
CPSF4-207ENST00000451876 LOC102723996A0A087X1L8 192 aa22.55■■□□□ 1.2
CPSF4-207ENST00000451876 MASP2O00187 686 aa22.55■■□□□ 1.2
CPSF4-207ENST00000451876 LRATO95237 230 aa22.55■■□□□ 1.2
CPSF4-207ENST00000451876 VAC14Q08AM6 782 aa22.55■■□□□ 1.2
CPSF4-207ENST00000451876 HEPACAMQ14CZ8 416 aa22.55■■□□□ 1.2
CPSF4-207ENST00000451876 LSM12Q3MHD2 195 aaKnown RBP22.55■■□□□ 1.2
CPSF4-207ENST00000451876 TMEM198Q66K66 360 aa22.55■■□□□ 1.2
CPSF4-207ENST00000451876 NXNQ6DKJ4 435 aa22.55■■□□□ 1.2
CPSF4-207ENST00000451876 ACTRT2Q8TDY3 377 aa22.55■■□□□ 1.2
CPSF4-207ENST00000451876 NACC2Q96BF6 587 aa22.55■■□□□ 1.2
CPSF4-207ENST00000451876 ASIC5Q9NY37 505 aa22.55■■□□□ 1.2
CPSF4-207ENST00000451876 EIF3LQ9Y262 564 aaKnown RBP22.55■■□□□ 1.2
CPSF4-207ENST00000451876 COX6A1P12074 109 aa22.54■■□□□ 1.2
CPSF4-207ENST00000451876 DRD2P14416 443 aa22.54■■□□□ 1.2
CPSF4-207ENST00000451876 DDCP20711 480 aa22.54■■□□□ 1.2
CPSF4-207ENST00000451876 CXADRP78310 365 aa22.54■■□□□ 1.2
CPSF4-207ENST00000451876 IGLV3-21P80748 117 aaPredicted RBP22.54■■□□□ 1.2
CPSF4-207ENST00000451876 STX4Q12846 297 aa22.54■■□□□ 1.2
CPSF4-207ENST00000451876 ITPR1Q14643 2758 aa22.54■■□□□ 1.2
CPSF4-207ENST00000451876 IKBIPQ70UQ0 350 aa22.54■■□□□ 1.2
CPSF4-207ENST00000451876 ALOXE3Q9BYJ1 711 aa22.54■■□□□ 1.2
CPSF4-207ENST00000451876 KCNK13Q9HB14 408 aa22.54■■□□□ 1.2
CPSF4-207ENST00000451876 MED13Q9UHV7 2174 aa22.54■■□□□ 1.2
CPSF4-207ENST00000451876 IGHV1-45A0A0A0MS14 117 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 AKAP10O43572 662 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 PRPS2P11908 318 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 SF3A3Q12874 501 aaKnown RBP eCLIP22.53■■□□□ 1.23e-6■■■■□ 19.7
CPSF4-207ENST00000451876 ST3GAL2Q16842 350 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 PRSS53Q2L4Q9 553 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 ZNF750Q32MQ0 723 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 SFT2D3Q587I9 215 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 CPEB2Q7Z5Q1 589 aaKnown RBP22.53■■□□□ 1.2
CPSF4-207ENST00000451876 CEP70Q8NHQ1 597 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 NUDT8Q8WV74 236 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 KLHL29Q96CT2 875 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 MARK4Q96L34 752 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 WDR77Q9BQA1 342 aaPredicted RBP22.53■■□□□ 1.2
CPSF4-207ENST00000451876 TRIM55Q9BYV6 548 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 TCF7L2Q9NQB0 619 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 A0A1W2PQ72 361 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 GPR75O95800 540 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 LSP1P33241 339 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 SEC24CP53992 1094 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 PCOLCEQ15113 449 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 ANKRD26P1Q6NSI1 321 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 TICAM1Q8IUC6 712 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 THAP4Q8WY91 577 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 MIEF1Q9NQG6 463 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 C19orf25Q9UFG5 118 aaPredicted RBP22.53■■□□□ 1.2
CPSF4-207ENST00000451876 FBXL4Q9UKA2 621 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 UTS2RQ9UKP6 389 aa22.53■■□□□ 1.2
CPSF4-207ENST00000451876 WBP11Q9Y2W2 641 aaKnown RBP22.53■■□□□ 1.2
CPSF4-207ENST00000451876 ATMQ13315 3056 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 A0A0G2JND7 137 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 A8MUA0 341 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 PCDH17O14917 1159 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 ERAL1O75616 437 aaKnown RBP22.52■■□□□ 1.2
CPSF4-207ENST00000451876 SEC24DO94855 1032 aaPredicted RBP22.52■■□□□ 1.2
CPSF4-207ENST00000451876 PIK3R1P27986 724 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 ASMTP46597 345 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 OR4D2P58180 307 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 GNGT1P63211 74 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 DUSP2Q05923 314 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 ACAD11Q709F0 780 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 KRTCAP2Q8N6L1 136 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 SNRNP27Q8WVK2 155 aaKnown RBP22.52■■□□□ 1.2
CPSF4-207ENST00000451876 EXOSC8Q96B26 276 aaKnown RBP22.52■■□□□ 1.2
CPSF4-207ENST00000451876 CNRIP1Q96F85 164 aaPredicted RBP22.52■■□□□ 1.2
CPSF4-207ENST00000451876 CHMP6Q96FZ7 201 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 AIG1Q9NVV5 245 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 EHD3Q9NZN3 535 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 POLHQ9Y253 713 aa22.52■■□□□ 1.2
CPSF4-207ENST00000451876 E9PBE3 544 aa22.51■■□□□ 1.19
CPSF4-207ENST00000451876 KLHL41O60662 606 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms