RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 CHST11Q9NPF2 352 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 HPF1Q9NWY4 346 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 ENTPD4Q9Y227 616 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 TEX15Q9BXT5 2789 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 NCOA6Q14686 2063 aaPredicted RBP14.89□□□□□ -0.03
SGCE-208ENST00000450385 EXOC1LA0A1B0GW35 172 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 TMEM200CA6NKL6 621 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 NPIPA5E9PKD4 350 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 PEX1O43933 1283 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 LDB3O75112 727 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 GUCY1B2O75343 617 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 GPR75O95800 540 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 OTCP00480 354 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 BSGP35613 385 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 RPS13P62277 151 aaKnown RBP14.89□□□□□ -0.03
SGCE-208ENST00000450385 PMP22Q01453 160 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 DDX39BQ13838 428 aaKnown RBP14.89□□□□□ -0.03
SGCE-208ENST00000450385 FRG2Q64ET8 278 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 CLNKQ7Z7G1 428 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 SULF2Q8IWU5 870 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 PLD6Q8N2A8 252 aaKnown RBP14.89□□□□□ -0.03
SGCE-208ENST00000450385 PTGR2Q8N8N7 351 aaPredicted RBP14.89□□□□□ -0.03
SGCE-208ENST00000450385 SLC2A12Q8TD20 617 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 ACMSDQ8TDX5 336 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 PHF21BQ96EK2 531 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 SENP5Q96HI0 755 aaPredicted RBP14.89□□□□□ -0.03
SGCE-208ENST00000450385 FBXL20Q96IG2 436 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 FRG2BQ96QU4 278 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 HES7Q9BYE0 225 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 OR8D2Q9GZM6 311 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 NOL11Q9H8H0 719 aaKnown RBP14.89□□□□□ -0.03
SGCE-208ENST00000450385 BRF2Q9HAW0 419 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 PCTPQ9UKL6 214 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 NPIPA1Q9UND3 350 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 ERVK-11Q9UQG0 969 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 ASB4Q9Y574 426 aa14.89□□□□□ -0.03
SGCE-208ENST00000450385 A0A0A6YYD5 115 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 OR6C76A6NM76 312 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 TRIM49D1C9J1S8 452 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 POC1B-GALNT4F8VUJ3 575 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 RTCAO00442 366 aaKnown RBP14.88□□□□□ -0.03
SGCE-208ENST00000450385 PRRG2O14669 202 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 HNRNPRO43390 633 aaKnown RBP14.88□□□□□ -0.03
SGCE-208ENST00000450385 OR2J2O76002 312 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 IGKV3-11P04433 115 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 FAM58BPP0C7Q3 252 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 ESRRAP11474 423 aaPredicted RBP14.88□□□□□ -0.03
SGCE-208ENST00000450385 ALOX15P16050 662 aaPredicted RBP14.88□□□□□ -0.03
SGCE-208ENST00000450385 TAC1P20366 129 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 DCTP40126 519 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 MEOX1P50221 254 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 HK2P52789 917 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 NAA20P61599 178 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 IFT88Q13099 833 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 SPRED3Q2MJR0 410 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 PIGGQ5H8A4 983 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 NDUFAF5Q5TEU4 345 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 RTL4Q6ZR62 310 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 MILR1Q7Z6M3 343 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 NUDT13Q86X67 352 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 CPSF7Q8N684 471 aaKnown RBP14.88□□□□□ -0.03
SGCE-208ENST00000450385 PSD4Q8NDX1 1056 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 ZNF721Q8TF20 911 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 PHF10Q8WUB8 498 aaKnown RBP14.88□□□□□ -0.03
SGCE-208ENST00000450385 ITLN2Q8WWU7 325 aaPredicted RBP14.88□□□□□ -0.03
SGCE-208ENST00000450385 SCYL1Q96KG9 808 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 RASL10BQ96S79 203 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 ZNF717Q9BY31 904 aaPredicted RBP14.88□□□□□ -0.03
SGCE-208ENST00000450385 STK38LQ9Y2H1 464 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 RNF11Q9Y3C5 154 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 DNAJC13O75165 2243 aa14.88□□□□□ -0.03
SGCE-208ENST00000450385 CROCCQ5TZA2 2017 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 IQANK1A0A1B0GTG1 560 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 E9PLN8 166 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 OR7A17O14581 309 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 TFECO14948 347 aaPredicted RBP14.87□□□□□ -0.03
SGCE-208ENST00000450385 SIX3O95343 332 aaPredicted RBP14.87□□□□□ -0.03
SGCE-208ENST00000450385 GSTA1P08263 222 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 SLC35E2P0CK97 266 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 CNR1P21554 472 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 FOLH1Q04609 750 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 TTC19Q6DKK2 380 aaPredicted RBP14.87□□□□□ -0.03
SGCE-208ENST00000450385 GK5Q6ZS86 529 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 SLC22A8Q8TCC7 542 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.87□□□□□ -0.03
SGCE-208ENST00000450385 TRIM44Q96DX7 344 aaPredicted RBP14.87□□□□□ -0.03
SGCE-208ENST00000450385 CCDC120Q96HB5 630 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 VKORC1Q9BQB6 163 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 PPCSQ9HAB8 311 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 PLSCR2Q9NRY7 297 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 XPR1Q9UBH6 696 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 SNX6Q9UNH7 406 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 ATG4BQ9Y4P1 393 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 EML6Q6ZMW3 1958 aa14.87□□□□□ -0.03
SGCE-208ENST00000450385 CAPN14A8MX76 684 aa14.86□□□□□ -0.03
SGCE-208ENST00000450385 ACOT7O00154 380 aa14.86□□□□□ -0.03
SGCE-208ENST00000450385 SAP18O00422 153 aaKnown RBP14.86□□□□□ -0.03
SGCE-208ENST00000450385 FGF17O60258 216 aa14.86□□□□□ -0.03
SGCE-208ENST00000450385 RPS17P08708 135 aaKnown RBP14.86□□□□□ -0.03
SGCE-208ENST00000450385 NR2F6P10588 404 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms