RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CCL27Q9Y4X3 112 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 GJA3Q9Y6H8 435 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 TP53BP1Q12888 1972 aaPredicted RBP8.23□□□□□ -1.09
LSM5-208ENST00000450169 ADAMDEC1O15204 470 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 MATN3O15232 486 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 ST8SIA5O15466 376 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 RGS14O43566 566 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 GNRH1P01148 92 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 DPEP1P16444 411 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 SMPD1P17405 629 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 CTPS1P17812 591 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 BTCP35070 178 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 HSD17B2P37059 387 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 MMP12P39900 470 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 GSTM5P46439 218 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 KIAA1024LP59773 190 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 TSPAN5P62079 268 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 DEFA5Q01523 94 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 SMAD2Q15796 467 aaKnown RBP8.23□□□□□ -1.09
LSM5-208ENST00000450169 HFEQ30201 348 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 METTL11BQ5VVY1 283 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 MEDAGQ5VYS4 303 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 MRNIPQ6NTE8 343 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 NOTUMQ6P988 496 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 TMEM91Q6ZNR0 172 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 HFE2Q6ZVN8 426 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 RAB11FIP2Q7L804 512 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 KRT74Q7RTS7 529 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 MCATQ8IVS2 390 aaKnown RBP8.23□□□□□ -1.09
LSM5-208ENST00000450169 LGI4Q8N135 537 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 EIF4E3Q8N5X7 224 aaKnown RBP8.23□□□□□ -1.09
LSM5-208ENST00000450169 NANOGP1Q8N7R0 232 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 PROKR2Q8NFJ6 384 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 OR6S1Q8NH40 331 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 PIH1D2Q8WWB5 315 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 ARL5BQ96KC2 179 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 FAM193BQ96PV7 902 aaPredicted RBP8.23□□□□□ -1.09
LSM5-208ENST00000450169 OSMRQ99650 979 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 RBM22Q9NW64 420 aaKnown RBP eCLIP8.23□□□□□ -1.09
LSM5-208ENST00000450169 GPR160Q9UJ42 338 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 ZNF236Q9UL36 1845 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 IGKV6D-21A0A0A0MT36 114 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 RAB19A4D1S5 217 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 TRABD2BA6NFA1 517 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 G3V3Q6 166 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 CASKO14936 926 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 MAFKO60675 156 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 ENTPD6O75354 484 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 KDM4BO94953 1096 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 KCNK5O95279 499 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 B3GALT4O96024 378 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 GJB1P08034 283 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 CHRM5P08912 532 aaPredicted RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 ITPKAP23677 461 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 S100A3P33764 101 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 PIK3CGP48736 1102 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 CXCR3P49682 368 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 NDUFV1P49821 464 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 MAZP56270 477 aaKnown RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 KCNJ10P78508 379 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 MBTD1Q05BQ5 628 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 FGL2Q14314 439 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 NTRK2Q16620 822 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 DGKKQ5KSL6 1271 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 SUSD1Q6UWL2 747 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 C5orf46Q6UWT4 87 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 TMIGD1Q6UXZ0 262 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 ZER1Q7Z7L7 766 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 ASPGQ86U10 573 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 GPR65Q8IYL9 337 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 ARRDC4Q8NCT1 418 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 OR52J3Q8NH60 311 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 TM9SF4Q92544 642 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 KCTD12Q96CX2 325 aaKnown RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 PCYT2Q99447 389 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 ZNF251Q9BRH9 671 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 NLNQ9BYT8 704 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 NKX6-2Q9C056 277 aaPredicted RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 DNTTIP1Q9H147 329 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 DPAGT1Q9H3H5 408 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 MINDY3Q9H8M7 445 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 EVA1AQ9H8M9 152 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 AGO3Q9H9G7 860 aaKnown RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 NMUR1Q9HB89 426 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 SLC25A19Q9HC21 320 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 DNAJC11Q9NVH1 559 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 DDIT4Q9NX09 232 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 TAS2R13Q9NYV9 303 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 ING1Q9UK53 422 aaPredicted RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 SLC6A5Q9Y345 797 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 KCTD3Q9Y597 815 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 NUBP2Q9Y5Y2 271 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 TSC2P49815 1807 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 RRN3P2A6NIE6 340 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 RFXANKO14593 260 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 SSNA1O43805 119 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 LANCL1O43813 399 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 EIF1BO60739 113 aaKnown RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 VTNP04004 478 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 IFNA4P05014 189 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms