RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 ZNF592Q92610 1267 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 UCN3Q969E3 161 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 MAGED4Q96JG8 741 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 NSUN5Q96P11 429 aaKnown RBP11.46□□□□□ -0.57
MSH5-209ENST00000450148 CDK15Q96Q40 435 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 PHF12Q96QT6 1004 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 NTMT1Q9BV86 223 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 TSPYL1Q9H0U9 437 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 RPF2Q9H7B2 306 aaKnown RBP11.46□□□□□ -0.57
MSH5-209ENST00000450148 NOL11Q9H8H0 719 aaKnown RBP11.46□□□□□ -0.57
MSH5-209ENST00000450148 DDX31Q9H8H2 851 aaKnown RBP11.46□□□□□ -0.57
MSH5-209ENST00000450148 MS4A12Q9NXJ0 267 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 XPR1Q9UBH6 696 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 SUCOQ9UBS9 1254 aaKnown RBP11.46□□□□□ -0.57
MSH5-209ENST00000450148 ZNF180Q9UJW8 692 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 PCTPQ9UKL6 214 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 MEMO1Q9Y316 297 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 TNPO3Q9Y5L0 923 aaKnown RBP11.46□□□□□ -0.57
MSH5-209ENST00000450148 KLF2Q9Y5W3 355 aaPredicted RBP11.46□□□□□ -0.57
MSH5-209ENST00000450148 SPACA6W5XKT8 324 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 NOTCH2Q04721 2471 aa11.46□□□□□ -0.58
MSH5-209ENST00000450148 PKDREJQ9NTG1 2253 aa11.46□□□□□ -0.58
MSH5-209ENST00000450148 ITPR2Q14571 2701 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 A0A0G2JMM0 328 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 A0A1W2PPB8 328 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 A0A1W2PR48 441 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 A0A1W2PRS3 328 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 A8MVJ9 347 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 KIR3DP1A8MWS1 328 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 TRIM49D1C9J1S8 452 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 PRSS44E7EML9 344 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 FOXE1O00358 373 aaPredicted RBP11.45□□□□□ -0.58
MSH5-209ENST00000450148 HS6ST1O60243 411 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 NADKO95544 446 aaPredicted RBP11.45□□□□□ -0.58
MSH5-209ENST00000450148 RPS17P08708 135 aaKnown RBP11.45□□□□□ -0.58
MSH5-209ENST00000450148 RBP1P09455 135 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 CTAGE8P0CG41 777 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 COL6A2P12110 1019 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 PRF1P14222 555 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 PTX3P26022 381 aaPredicted RBP11.45□□□□□ -0.58
MSH5-209ENST00000450148 RAP1GDS1P52306 607 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 FOLH1Q04609 750 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 ZNF750Q32MQ0 723 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 FAM219BQ5XKK7 198 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 LYPD8Q6UX82 237 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 IL20RBQ6UXL0 311 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 RPTNQ6XPR3 784 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 BNC2Q6ZN30 1099 aaPredicted RBP11.45□□□□□ -0.58
MSH5-209ENST00000450148 RPS27LQ71UM5 84 aaKnown RBP11.45□□□□□ -0.58
MSH5-209ENST00000450148 DOLPP1Q86YN1 238 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 LURAP1LQ8IV03 231 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 CTAGE4Q8IX94 777 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 C9orf40Q8IXQ3 194 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 OR52N2Q8NGI0 321 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 UHMK1Q8TAS1 419 aaKnown RBP11.45□□□□□ -0.58
MSH5-209ENST00000450148 ASB15Q8WXK1 588 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 TANKQ92844 425 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 PPWD1Q96BP3 646 aaKnown RBP11.45□□□□□ -0.58
MSH5-209ENST00000450148 PHF21BQ96EK2 531 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 SENP5Q96HI0 755 aaPredicted RBP11.45□□□□□ -0.58
MSH5-209ENST00000450148 SCYL1Q96KG9 808 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 DMRTA2Q96SC8 542 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 TIMMDC1Q9NPL8 285 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 HPF1Q9NWY4 346 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 PHF11Q9UIL8 331 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 HRH3Q9Y5N1 445 aa11.45□□□□□ -0.58
MSH5-209ENST00000450148 HCFC1P51610 2035 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 A0A1B0GTH9 108 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 A0A1W2PS29 197 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 POC1B-GALNT4F8VUJ3 575 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 PPP6CO00743 305 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 HNRNPRO43390 633 aaKnown RBP11.44□□□□□ -0.58
MSH5-209ENST00000450148 SEMA3DO95025 777 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 CLDN9O95484 217 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 AIFM1O95831 613 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 CLPSP04118 112 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 TUBB4AP04350 444 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 TNNI3P19429 210 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 AGAP20933 346 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 CASP6P55212 293 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 BIKQ13323 160 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 ZNF630Q2M218 657 aaPredicted RBP11.44□□□□□ -0.58
MSH5-209ENST00000450148 MPEG1Q2M385 716 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 TSNAXIP1Q2TAA8 658 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 GGTA1PQ4G0N0 100 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 XKRXQ6PP77 449 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 ADGRD1Q6QNK2 874 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 C7orf57Q8NEG2 295 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 MNS1Q8NEH6 495 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 OR2M7Q8NG81 312 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 NUBPLQ8TB37 319 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 DOK4Q8TEW6 326 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 AGAP11Q8TF27 550 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 REPS1Q96D71 796 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 DGAT2Q96PD7 388 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 CENPKQ9BS16 269 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 C1QTNF3Q9BXJ4 246 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 SH2D2AQ9NP31 389 aa11.44□□□□□ -0.58
MSH5-209ENST00000450148 LYARQ9NX58 379 aaKnown RBP11.44□□□□□ -0.58
MSH5-209ENST00000450148 ZNF225Q9UK10 706 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms