RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 GABPB2Q8TAK5 448 aaPredicted RBP7.15□□□□□ -1.26
LINC01961-201ENST00000449954 STYXQ8WUJ0 223 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 LRRC45Q96CN5 670 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 REPS1Q96D71 796 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 TM4SF19Q96DZ7 209 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 CDKN2AIPNLQ96HQ2 116 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 PDLIM2Q96JY6 352 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 ZNF597Q96LX8 424 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 FANCD2OSQ96PS1 177 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 APOL2Q9BQE5 337 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 UGT2B28Q9BY64 529 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 GBA3Q9H227 469 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 LIN28AQ9H9Z2 209 aaKnown RBP7.15□□□□□ -1.26
LINC01961-201ENST00000449954 NECTIN3Q9NQS3 549 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.15□□□□□ -1.26
LINC01961-201ENST00000449954 TMEM184CQ9NVA4 438 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 CNIH4Q9P003 139 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 AAR2Q9Y312 384 aaKnown RBP7.15□□□□□ -1.26
LINC01961-201ENST00000449954 MMACHCQ9Y4U1 282 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 MAGED1Q9Y5V3 778 aaPredicted RBP7.15□□□□□ -1.26
LINC01961-201ENST00000449954 IKBKGQ9Y6K9 419 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 A0A1W2PP18 115 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 MYO1CO00159 1063 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 SSX4O60224 188 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 OR1I1O60431 355 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 ACTL6AO96019 429 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 PLAUP00749 431 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 C1QAP02745 245 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 HPNP05981 417 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 RNH1P13489 461 aaKnown RBP7.14□□□□□ -1.27
LINC01961-201ENST00000449954 FOXN2P32314 431 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 GCKP35557 465 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 PPARGP37231 505 aaPredicted RBP7.14□□□□□ -1.27
LINC01961-201ENST00000449954 RBMXP38159 391 aaKnown RBP7.14□□□□□ -1.27
LINC01961-201ENST00000449954 RPL21P46778 160 aaKnown RBP7.14□□□□□ -1.27
LINC01961-201ENST00000449954 CDK9P50750 372 aaKnown RBP7.14□□□□□ -1.27
LINC01961-201ENST00000449954 PNLIPRP1P54315 467 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 PRAMEF20Q5VT98 475 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 ITPRIPL1Q6GPH6 555 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 HSCBQ8IWL3 235 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 OR5L2Q8NGL0 311 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 LKAAEAR1Q8TD35 194 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 STK35Q8TDR2 534 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 SMAP2Q8WU79 429 aaPredicted RBP7.14□□□□□ -1.27
LINC01961-201ENST00000449954 SLC44A1Q8WWI5 657 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 SLC13A3Q8WWT9 602 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 RAPGEF5Q92565 580 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 ABTB1Q969K4 478 aaPredicted RBP7.14□□□□□ -1.27
LINC01961-201ENST00000449954 PLPPR2Q96GM1 343 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 JSRP1Q96MG2 331 aaPredicted RBP7.14□□□□□ -1.27
LINC01961-201ENST00000449954 PPP1R2P1Q96PQ5 205 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 ALS2CR12Q96Q35 445 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 PANX3Q96QZ0 392 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 KRT12Q99456 494 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 MACROD1Q9BQ69 325 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 DOHHQ9BU89 302 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 ARNT2Q9HBZ2 717 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 SSU72Q9NP77 194 aaKnown RBP7.14□□□□□ -1.27
LINC01961-201ENST00000449954 ADAP2Q9NPF8 381 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 PNO1Q9NRX1 252 aaKnown RBP7.14□□□□□ -1.27
LINC01961-201ENST00000449954 FAM114A2Q9NRY5 505 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 LCMT1Q9UIC8 334 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 MAPRE3Q9UPY8 281 aa7.14□□□□□ -1.27
LINC01961-201ENST00000449954 RUVBL2Q9Y230 463 aaKnown RBP7.14□□□□□ -1.27
LINC01961-201ENST00000449954 H0Y3Z8 333 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 H7BY64 318 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 PAX4O43316 350 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 NDUFS7O75251 213 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 TRAPPC6AO75865 159 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 PROSCO94903 275 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 FTCDO95954 541 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 CCDC166P0CW27 439 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 CPN1P15169 458 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 ALOX12P18054 663 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 USF1P22415 310 aaPredicted RBP7.13□□□□□ -1.27
LINC01961-201ENST00000449954 PSMA3P25788 255 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 DPP4P27487 766 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 ATP5DP30049 168 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 SLCO1A2P46721 670 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 KCNJ5P48544 419 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 TAS2R40P59535 323 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 DYNLT1P63172 113 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 PRPSAP1Q14558 356 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 ELAVL1Q15717 326 aaKnown RBP7.13□□□□□ -1.27
LINC01961-201ENST00000449954 MPEG1Q2M385 716 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 ZNF791Q3KP31 576 aaPredicted RBP7.13□□□□□ -1.27
LINC01961-201ENST00000449954 DEFB134Q4QY38 66 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.13□□□□□ -1.27
LINC01961-201ENST00000449954 DCST1Q5T197 706 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 THEMIS2Q5TEJ8 643 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 OR2A2Q6IF42 318 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 CAPN13Q6MZZ7 669 aaPredicted RBP7.13□□□□□ -1.27
LINC01961-201ENST00000449954 ZNF474Q6S9Z5 364 aaPredicted RBP7.13□□□□□ -1.27
LINC01961-201ENST00000449954 ZNF571Q7Z3V5 609 aaPredicted RBP7.13□□□□□ -1.27
LINC01961-201ENST00000449954 RFX6Q8HWS3 928 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 TMEM132CQ8N3T6 1108 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 ZNF740Q8NDX6 193 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 FAM216AQ8WUB2 273 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 PROX1Q92786 737 aa7.13□□□□□ -1.27
LINC01961-201ENST00000449954 KAT2AQ92830 837 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms