RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 FEN1P39748 380 aaKnown RBP18.15■□□□□ 0.5
SDCBP-204ENST00000447182 DGKGP49619 791 aa18.15■□□□□ 0.5
SDCBP-204ENST00000447182 DGKEP52429 567 aa18.15■□□□□ 0.5
SDCBP-204ENST00000447182 WDR5P61964 334 aaKnown RBP18.15■□□□□ 0.5
SDCBP-204ENST00000447182 SP3Q02447 781 aa18.15■□□□□ 0.5
SDCBP-204ENST00000447182 TAP2Q03519 686 aa18.15■□□□□ 0.5
SDCBP-204ENST00000447182 LARS2Q15031 903 aaKnown RBP18.15■□□□□ 0.5
SDCBP-204ENST00000447182 OR9Q1Q8NGQ5 310 aa18.15■□□□□ 0.5
SDCBP-204ENST00000447182 OR9A1PQ8NGU1 263 aa18.15■□□□□ 0.5
SDCBP-204ENST00000447182 UBE2E3Q969T4 207 aa18.15■□□□□ 0.5
SDCBP-204ENST00000447182 SLC25A46Q96AG3 418 aa18.15■□□□□ 0.5
SDCBP-204ENST00000447182 PPP1R16AQ96I34 528 aa18.15■□□□□ 0.5
SDCBP-204ENST00000447182 TEFMQ96QE5 360 aaKnown RBP18.15■□□□□ 0.5
SDCBP-204ENST00000447182 POLR2J2Q9GZM3 115 aaKnown RBP18.15■□□□□ 0.5
SDCBP-204ENST00000447182 SPNS1Q9H2V7 528 aa18.15■□□□□ 0.5
SDCBP-204ENST00000447182 ACAD8Q9UKU7 415 aa18.15■□□□□ 0.5
SDCBP-204ENST00000447182 NINQ8N4C6 2090 aa18.15■□□□□ 0.5
SDCBP-204ENST00000447182 HMX3A6NHT5 357 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 CENPBD1B2RD01 187 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 C5orf58C9J3I9 102 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 NRG2O14511 850 aaPredicted RBP18.14■□□□□ 0.5
SDCBP-204ENST00000447182 SEC14L5O43304 696 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 CYP7B1O75881 506 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 SOX14O95416 240 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 IL1AP01583 271 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 CYP17A1P05093 508 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 PBLDP30039 288 aaPredicted RBP18.14■□□□□ 0.5
SDCBP-204ENST00000447182 C1DQ13901 141 aaKnown RBP18.14■□□□□ 0.5
SDCBP-204ENST00000447182 GLYR1Q49A26 553 aaPredicted RBP18.14■□□□□ 0.5
SDCBP-204ENST00000447182 ZFP69Q49AA0 526 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 RPS26P11Q5JNZ5 115 aaPredicted RBP18.14■□□□□ 0.5
SDCBP-204ENST00000447182 ADIPOR2Q86V24 386 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 PHC2Q8IXK0 858 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 HORMAD2Q8N7B1 307 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 PHOX2BQ99453 314 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 FUZQ9BT04 418 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 TSSK6Q9BXA6 273 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 SLC46A2Q9BY10 475 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 MCOLN1Q9GZU1 580 aa18.14■□□□□ 0.5
SDCBP-204ENST00000447182 TEX28O15482 410 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 OR10H3O60404 316 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 PDE9AO76083 593 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 BCHEP06276 602 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 H1F0P07305 194 aaKnown RBP18.14■□□□□ 0.49
SDCBP-204ENST00000447182 IGFBP1P08833 259 aaPredicted RBP18.14■□□□□ 0.49
SDCBP-204ENST00000447182 IRS1P35568 1242 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 SCN1BQ07699 218 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 FOXD4Q12950 439 aaPredicted RBP18.14■□□□□ 0.49
SDCBP-204ENST00000447182 ASAH1Q13510 395 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 ARSIQ5FYB1 569 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 SLC25A30Q5SVS4 291 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 PGBD2Q6P3X8 592 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 DDX53Q86TM3 631 aaKnown RBP18.14■□□□□ 0.49
SDCBP-204ENST00000447182 CLDN22Q8N7P3 220 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 AP2M1Q96CW1 435 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 TMEM19Q96HH6 336 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 MSLNLQ96KJ4 702 aa18.14■□□□□ 0.49
SDCBP-204ENST00000447182 RSPO3Q9BXY4 272 aaPredicted RBP18.14■□□□□ 0.49
SDCBP-204ENST00000447182 SMG9Q9H0W8 520 aaKnown RBP18.14■□□□□ 0.49
SDCBP-204ENST00000447182 POLR2J3Q9H1A7 115 aaKnown RBP18.14■□□□□ 0.49
SDCBP-204ENST00000447182 MTCL1Q9Y4B5 1905 aaKnown RBP18.14■□□□□ 0.49
SDCBP-204ENST00000447182 A0A1W2PQ09 198 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 A0A1W2PRU2 124 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 MEIOCA2RUB1 952 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 CENPXA8MT69 81 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 HEPACAM2A8MVW5 462 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 HOXC11O43248 304 aaPredicted RBP18.13■□□□□ 0.49
SDCBP-204ENST00000447182 TBX19O60806 448 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 MEF2AQ02078 507 aaPredicted RBP18.13■□□□□ 0.49
SDCBP-204ENST00000447182 ALDH6A1Q02252 535 aaKnown RBP18.13■□□□□ 0.49
SDCBP-204ENST00000447182 TSTA3Q13630 321 aaPredicted RBP18.13■□□□□ 0.49
SDCBP-204ENST00000447182 HEPACAMQ14CZ8 416 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 WDR53Q7Z5U6 358 aaPredicted RBP18.13■□□□□ 0.49
SDCBP-204ENST00000447182 NRSN1Q8IZ57 195 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 MMP21Q8N119 569 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 FAM26EQ8N5C1 309 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 NATD1Q8N6N6 113 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 OR5P2Q8WZ92 322 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 ZNF689Q96CS4 500 aaPredicted RBP18.13■□□□□ 0.49
SDCBP-204ENST00000447182 DDX28Q9NUL7 540 aaKnown RBP18.13■□□□□ 0.49
SDCBP-204ENST00000447182 DIMT1Q9UNQ2 313 aaKnown RBP18.13■□□□□ 0.49
SDCBP-204ENST00000447182 NEDD8-MDP1E9PL57 170 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 H3BN98 237 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 SCO2O43819 266 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 TP53P04637 393 aaPredicted RBP18.13■□□□□ 0.49
SDCBP-204ENST00000447182 GJA1P17302 382 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 DDCP20711 480 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 OPRD1P41143 372 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 SMIM11AP58511 58 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 HYAL2Q12891 473 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 CDK10Q15131 360 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 XKRXQ6PP77 449 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 LIPIQ6XZB0 460 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 SLC9B2Q86UD5 537 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 GATAD2AQ86YP4 633 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 TCEANCQ8N8B7 351 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 ASCC1Q8N9N2 400 aaKnown RBP18.13■□□□□ 0.49
SDCBP-204ENST00000447182 SETD7Q8WTS6 366 aaKnown RBP18.13■□□□□ 0.49
SDCBP-204ENST00000447182 ZNF354BQ96LW1 612 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 SLC22A4Q9H015 551 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms