RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 CNIH4Q9P003 139 aa22.46■■□□□ 1.19
PMS1-214ENST00000446877 FOXD3Q9UJU5 478 aaPredicted RBP22.46■■□□□ 1.19
PMS1-214ENST00000446877 ZNF490Q9ULM2 529 aaPredicted RBP22.46■■□□□ 1.19
PMS1-214ENST00000446877 VPS13CQ709C8 3753 aa22.46■■□□□ 1.19
PMS1-214ENST00000446877 FAM95CA0A1B0GW59 222 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 RFPL3SP0C7P2 107 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 TAS2R39P59534 338 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 KEAP1Q14145 624 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 DAZAP2Q15038 168 aaPredicted RBP22.45■■□□□ 1.18
PMS1-214ENST00000446877 HIST2H2ACQ16777 129 aaPredicted RBP22.45■■□□□ 1.18
PMS1-214ENST00000446877 PAGE2BQ5JRK9 111 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 PRAMEF20Q5VT98 475 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 HIST2H2AA3Q6FI13 130 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 ADNP2Q6IQ32 1131 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 ZC3HC1Q86WB0 502 aaKnown RBP22.45■■□□□ 1.18
PMS1-214ENST00000446877 SLC15A4Q8N697 577 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 NEIL3Q8TAT5 605 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 ANKRD49Q8WVL7 239 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 SPACA9Q96E40 222 aaPredicted RBP22.45■■□□□ 1.18
PMS1-214ENST00000446877 PTCD3Q96EY7 689 aaKnown RBP22.45■■□□□ 1.18
PMS1-214ENST00000446877 RBM18Q96H35 190 aaKnown RBP22.45■■□□□ 1.18
PMS1-214ENST00000446877 CAPZA3Q96KX2 299 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 EFCAB11Q9BUY7 163 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 SLC6A15Q9H2J7 730 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.45■■□□□ 1.18
PMS1-214ENST00000446877 QPCTLQ9NXS2 382 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 CBLCQ9ULV8 474 aa22.45■■□□□ 1.18
PMS1-214ENST00000446877 AHRRA9YTQ3 701 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 RAF1P04049 648 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 MSH2P43246 934 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 TRPC1P48995 793 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 LAPTM5Q13571 262 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 DOC2AQ14183 400 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 TGFBIQ15582 683 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 PAMR1Q6UXH9 720 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 SEM1Q6ZVN7 128 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 MAATS1Q7Z4T9 603 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 BIVMQ86UB2 503 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 DND1Q8IYX4 353 aaKnown RBP22.44■■□□□ 1.18
PMS1-214ENST00000446877 LRRC25Q8N386 305 aaPredicted RBP22.44■■□□□ 1.18
PMS1-214ENST00000446877 ACOT4Q8N9L9 421 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 RELL2Q8NC24 303 aaPredicted RBP22.44■■□□□ 1.18
PMS1-214ENST00000446877 FAM13CQ8NE31 585 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 ANKRD9Q96BM1 317 aaPredicted RBP22.44■■□□□ 1.18
PMS1-214ENST00000446877 ART5Q96L15 291 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 SH3GL2Q99962 352 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 SH2D2AQ9NP31 389 aa22.44■■□□□ 1.18
PMS1-214ENST00000446877 ZNF629Q9UEG4 869 aaPredicted RBP22.44■■□□□ 1.18
PMS1-214ENST00000446877 C15orf38-AP3S2A0A0A6YYH1 394 aa22.43■■□□□ 1.18
PMS1-214ENST00000446877 CPN2P22792 545 aa22.43■■□□□ 1.18
PMS1-214ENST00000446877 ATP5A1P25705 553 aaKnown RBP22.43■■□□□ 1.18
PMS1-214ENST00000446877 SERPINB3P29508 390 aa22.43■■□□□ 1.18
PMS1-214ENST00000446877 STT3AP46977 705 aa22.43■■□□□ 1.18
PMS1-214ENST00000446877 SLC12A2P55011 1212 aa22.43■■□□□ 1.18
PMS1-214ENST00000446877 MGAT5Q09328 741 aa22.43■■□□□ 1.18
PMS1-214ENST00000446877 AP5B1Q2VPB7 878 aa22.43■■□□□ 1.18
PMS1-214ENST00000446877 FBXL19-AS1Q494R0 122 aa22.43■■□□□ 1.18
PMS1-214ENST00000446877 KIF18BQ86Y91 864 aa22.43■■□□□ 1.18
PMS1-214ENST00000446877 ACTRT1Q8TDG2 376 aa22.43■■□□□ 1.18
PMS1-214ENST00000446877 LRRC39Q96DD0 335 aa22.43■■□□□ 1.18
PMS1-214ENST00000446877 KRT12Q99456 494 aa22.43■■□□□ 1.18
PMS1-214ENST00000446877 PSAT1Q9Y617 370 aa22.43■■□□□ 1.18
PMS1-214ENST00000446877 TUBAL3A6NHL2 446 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 STK16O75716 305 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 EPPINO95925 133 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 IL2RAP01589 272 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 HIST1H1TP22492 207 aaPredicted RBP22.42■■□□□ 1.18
PMS1-214ENST00000446877 GGT5P36269 586 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 LTBQ06643 244 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 BIKQ13323 160 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 FRG1Q14331 258 aaKnown RBP22.42■■□□□ 1.18
PMS1-214ENST00000446877 SF3B4Q15427 424 aaKnown RBP eCLIP22.42■■□□□ 1.18
PMS1-214ENST00000446877 PDK4Q16654 411 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 DEFB113Q30KQ7 82 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 TMEM35AQ53FP2 167 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 STEAP4Q687X5 459 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 ADGRD1Q6QNK2 874 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 ZNF793Q6ZN11 406 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 UBE3DQ7Z6J8 389 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 GPSM1Q86YR5 675 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 OR4N5Q8IXE1 308 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 C9orf40Q8IXQ3 194 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 TNIP2Q8NFZ5 429 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 DOHHQ9BU89 302 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 PHACTR1Q9C0D0 580 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 PPP2R2CQ9Y2T4 447 aa22.42■■□□□ 1.18
PMS1-214ENST00000446877 IQANK1A0A1B0GTG1 560 aa22.41■■□□□ 1.18
PMS1-214ENST00000446877 LRRC3CA6NJW4 275 aa22.41■■□□□ 1.18
PMS1-214ENST00000446877 RTCAO00442 366 aaKnown RBP22.41■■□□□ 1.18
PMS1-214ENST00000446877 TAPBPO15533 448 aa22.41■■□□□ 1.18
PMS1-214ENST00000446877 IGKV3-11P04433 115 aa22.41■■□□□ 1.18
PMS1-214ENST00000446877 EPXP11678 715 aa22.41■■□□□ 1.18
PMS1-214ENST00000446877 TACR1P25103 407 aa22.41■■□□□ 1.18
PMS1-214ENST00000446877 CEACAM8P31997 349 aaPredicted RBP22.41■■□□□ 1.18
PMS1-214ENST00000446877 HSPA7P48741 367 aa22.41■■□□□ 1.18
PMS1-214ENST00000446877 IRF8Q02556 426 aa22.41■■□□□ 1.18
PMS1-214ENST00000446877 MORF4L2Q15014 288 aa22.41■■□□□ 1.18
PMS1-214ENST00000446877 ACSF3Q4G176 576 aaPredicted RBP22.41■■□□□ 1.18
PMS1-214ENST00000446877 SULT1C3Q6IMI6 304 aa22.41■■□□□ 1.18
PMS1-214ENST00000446877 CHSY3Q70JA7 882 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms