RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 C17orf105B2RV13 164 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 PGRMC2O15173 223 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 ULK1O75385 1050 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 TNNI3P19429 210 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 SERPINB3P29508 390 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 ALDH3A1P30838 453 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 TLX1P31314 330 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-204ENST00000446876 GPR143P51810 404 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 IGLV3-21P80748 117 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-204ENST00000446876 CSTF3Q12996 717 aaKnown RBP13.83□□□□□ -0.2
HDAC4-204ENST00000446876 TUBA3CQ13748 450 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 SERTAD2Q14140 314 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 TERF2Q15554 542 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 MEP1AQ16819 746 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 CEP85LQ5SZL2 805 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 ZNF468Q5VIY5 522 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-204ENST00000446876 TUBA3EQ6PEY2 450 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 C16orf47Q6ZP98 133 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-204ENST00000446876 RPS19BP1Q86WX3 136 aaKnown RBP13.83□□□□□ -0.2
HDAC4-204ENST00000446876 HAS2Q92819 552 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 VMP1Q96GC9 406 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 DEFB126Q9BYW3 111 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 OR8D2Q9GZM6 311 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 RNF32Q9H0A6 362 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 CENPHQ9H3R5 247 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 LIN28AQ9H9Z2 209 aaKnown RBP13.83□□□□□ -0.2
HDAC4-204ENST00000446876 AHSPQ9NZD4 102 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 VPS29Q9UBQ0 182 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 MID2Q9UJV3 735 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 ADAM29Q9UKF5 820 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 CLCA3PQ9Y6N3 262 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 HRKO00198 91 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 RGS16O15492 202 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-204ENST00000446876 TYROBPO43914 113 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 DDAH2O95865 285 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 TUBBP07437 444 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 STT3AP46977 705 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 UQCRFS1P47985 274 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 CLCN2P51788 898 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 MAPK12P53778 367 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 SRSF11Q05519 484 aaKnown RBP13.82□□□□□ -0.2
HDAC4-204ENST00000446876 BTKQ06187 659 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 CLEC6AQ6EIG7 209 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 ZCCHC23Q6ZST2 131 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 PAGE2Q7Z2X7 111 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 TMEM132CQ8N3T6 1108 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 OR14A16Q8NHC5 309 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 SLC2A12Q8TD20 617 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 TANKQ92844 425 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 APIPQ96GX9 242 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 DGAT2Q96PD7 388 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 SIGLEC12Q96PQ1 595 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 HES7Q9BYE0 225 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 WDR41Q9HAD4 459 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 PPIEQ9UNP9 301 aaKnown RBP13.82□□□□□ -0.2
HDAC4-204ENST00000446876 FIS1Q9Y3D6 152 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 PTGDR2Q9Y5Y4 395 aa13.82□□□□□ -0.2
HDAC4-204ENST00000446876 TRAV17A0A0B4J275 112 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 TRIM13O60858 407 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 CRCPO75575 148 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 GPR75O95800 540 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 HSD3B1P14060 373 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 ALOX15P16050 662 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-204ENST00000446876 HSD3B2P26439 372 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 CD96P40200 585 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 MLF1P58340 268 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 RAE1P78406 368 aaKnown RBP13.81□□□□□ -0.2
HDAC4-204ENST00000446876 PLIN5Q00G26 463 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 ZNF750Q32MQ0 723 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 NDUFAF5Q5TEU4 345 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 OR52E8Q6IFG1 317 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 CHTF18Q8WVB6 975 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 DAZLQ92904 295 aaKnown RBP13.81□□□□□ -0.2
HDAC4-204ENST00000446876 UTP23Q9BRU9 249 aaKnown RBP13.81□□□□□ -0.2
HDAC4-204ENST00000446876 EBPLQ9BY08 206 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 NMRK1Q9NWW6 199 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 ABI3Q9P2A4 366 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 COPG1Q9Y678 874 aaKnown RBP13.81□□□□□ -0.2
HDAC4-204ENST00000446876 CROCCQ5TZA2 2017 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 TENM4Q6N022 2769 aa13.81□□□□□ -0.2
HDAC4-204ENST00000446876 OR10H2O60403 315 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 PRAMEF2O60811 474 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 CHRNGP07510 517 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 GNLYP22749 145 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 PTGER1P34995 402 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 NAA20P61599 178 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 PMP22Q01453 160 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 OC90Q02509 493 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-204ENST00000446876 KCNC4Q03721 635 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 OR1C1Q15619 314 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 SPINK14Q6IE38 97 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 EXOC3L1Q86VI1 746 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 ATCAYQ86WG3 371 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 LGI4Q8N135 537 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 GBP7Q8N8V2 638 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-204ENST00000446876 MORN4Q8NDC4 146 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 MDS2Q8NDY4 140 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 GRHL3Q8TE85 626 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 ZNF721Q8TF20 911 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 TM4SF18Q96CE8 201 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms