RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 TXNDC8Q6A555 127 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 OR11H7Q8NGC8 314 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 ZNF461Q8TAF7 563 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 MAL2Q969L2 176 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 TMEM169Q96HH4 297 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 PANX1Q96RD7 426 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 RANBP3Q9H6Z4 567 aaPredicted RBP16.03■□□□□ 0.16
PMS1-213ENST00000441310 CWH43Q9H720 699 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 FNIP2Q9P278 1114 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 YIPF1Q9Y548 306 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 GLUD1P00367 558 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 CNR2P34972 360 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 NUP62P37198 522 aaPredicted RBP16.02■□□□□ 0.16
PMS1-213ENST00000441310 DEFB103AP81534 67 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 ASB18Q6ZVZ8 466 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 SERPINA11Q86U17 422 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 BBS7Q8IWZ6 715 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 ZSWIM3Q96MP5 696 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 IFT22Q9H7X7 185 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 PDFQ9HBH1 243 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 C11orf16Q9NQ32 467 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 MRPL39Q9NYK5 338 aaKnown RBP16.02■□□□□ 0.16
PMS1-213ENST00000441310 ZNF175Q9Y473 711 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 CDH10Q9Y6N8 788 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 UPK3BL1B0FP48 263 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 UPK3BL2E5RIL1 263 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 H3BNC9 293 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 LINC01387J3KSC0 135 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 FEN1P39748 380 aaKnown RBP16.02■□□□□ 0.16
PMS1-213ENST00000441310 AKR1D1P51857 326 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 ERVK-21P61565 698 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 SMAD3P84022 425 aaKnown RBP16.02■□□□□ 0.16
PMS1-213ENST00000441310 ARL14EPQ8N8R7 260 aaPredicted RBP16.02■□□□□ 0.16
PMS1-213ENST00000441310 PIH1D2Q8WWB5 315 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 GIMAP5Q96F15 307 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 TMEM175Q9BSA9 504 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 RBCK1Q9BYM8 510 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 SLAMF7Q9NQ25 335 aa16.02■□□□□ 0.16
PMS1-213ENST00000441310 CNOT2Q9NZN8 540 aaKnown RBP16.02■□□□□ 0.16
PMS1-213ENST00000441310 A0A1W2PPL8 197 aa16.02■□□□□ 0.15
PMS1-213ENST00000441310 SLC28A1O00337 649 aa16.02■□□□□ 0.15
PMS1-213ENST00000441310 TPST2O60704 377 aa16.02■□□□□ 0.15
PMS1-213ENST00000441310 PKMP14618 531 aaKnown RBP16.02■□□□□ 0.15
PMS1-213ENST00000441310 GJA1P17302 382 aa16.02■□□□□ 0.15
PMS1-213ENST00000441310 SDHBP21912 280 aa16.02■□□□□ 0.15
PMS1-213ENST00000441310 ITGB7P26010 798 aa16.02■□□□□ 0.15
PMS1-213ENST00000441310 ACVR1Q04771 509 aa16.02■□□□□ 0.15
PMS1-213ENST00000441310 BAMBIQ13145 260 aa16.02■□□□□ 0.15
PMS1-213ENST00000441310 LGALSLQ3ZCW2 172 aaPredicted RBP16.02■□□□□ 0.15
PMS1-213ENST00000441310 HSDL2Q6YN16 418 aa16.02■□□□□ 0.15
PMS1-213ENST00000441310 RTL4Q6ZR62 310 aa16.02■□□□□ 0.15
PMS1-213ENST00000441310 CD200R1Q8TD46 325 aa16.02■□□□□ 0.15
PMS1-213ENST00000441310 HDHD2Q9H0R4 259 aa16.02■□□□□ 0.15
PMS1-213ENST00000441310 PLXNA3P51805 1871 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 FPGTO14772 594 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 IL1AP01583 271 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 CCL5P13501 91 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 ERVFC1P60507 584 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 ZNF628Q5EBL2 1059 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 BCDIN3DQ7Z5W3 292 aaKnown RBP16.01■□□□□ 0.15
PMS1-213ENST00000441310 TSEN54Q7Z6J9 526 aaKnown RBP16.01■□□□□ 0.15
PMS1-213ENST00000441310 DNAJB7Q7Z6W7 309 aaPredicted RBP16.01■□□□□ 0.15
PMS1-213ENST00000441310 LUZP2Q86TE4 346 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 C7orf57Q8NEG2 295 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 OR52P1PQ8NH57 321 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 CDC26Q8NHZ8 85 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 KIAA1143Q96AT1 154 aaPredicted RBP16.01■□□□□ 0.15
PMS1-213ENST00000441310 C1GALT1C1Q96EU7 318 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 FOPNLQ96NB1 174 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 NELL2Q99435 816 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 EGFL8Q99944 293 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 APOL5Q9BWW9 433 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 TM6SF2Q9BZW4 377 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 PPP1R3EQ9H7J1 279 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 NDUFB11Q9NX14 153 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 LSM2Q9Y333 95 aaKnown RBP16.01■□□□□ 0.15
PMS1-213ENST00000441310 C5orf42Q9H799 3197 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 KHNYNO15037 678 aaKnown RBP16.01■□□□□ 0.15
PMS1-213ENST00000441310 ANXA8P13928 327 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 CXCL3P19876 107 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 AVPR1BP47901 424 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 CASP9P55211 416 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 CTBP2P56545 445 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 CRYZQ08257 329 aaKnown RBP16.01■□□□□ 0.15
PMS1-213ENST00000441310 ATXN7L2Q5T6C5 722 aaPredicted RBP16.01■□□□□ 0.15
PMS1-213ENST00000441310 SRFBP1Q8NEF9 429 aaKnown RBP16.01■□□□□ 0.15
PMS1-213ENST00000441310 TMEM43Q9BTV4 400 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 MAGEH1Q9H213 219 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 CUEDC1Q9NWM3 386 aaPredicted RBP16.01■□□□□ 0.15
PMS1-213ENST00000441310 NUDT4Q9NZJ9 180 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 AFF4Q9UHB7 1163 aaKnown RBP16.01■□□□□ 0.15
PMS1-213ENST00000441310 RAI2Q9Y5P3 530 aa16.01■□□□□ 0.15
PMS1-213ENST00000441310 TEX46H3BTG2 121 aa16■□□□□ 0.15
PMS1-213ENST00000441310 K7ERQ8 282 aa16■□□□□ 0.15
PMS1-213ENST00000441310 TBL1XO60907 577 aa16■□□□□ 0.15
PMS1-213ENST00000441310 TOXO94900 526 aa16■□□□□ 0.15
PMS1-213ENST00000441310 FGF1P05230 155 aa16■□□□□ 0.15
PMS1-213ENST00000441310 ACRP10323 421 aa16■□□□□ 0.15
PMS1-213ENST00000441310 RPL35P42766 123 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms