RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 EFCAB1Q9HAE3 211 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PDFQ9HBH1 243 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 POPDC3Q9HBV1 291 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 SYTL2Q9HCH5 934 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 S100A14Q9HCY8 104 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 MRGBPQ9NV56 204 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 NLE1Q9NVX2 485 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 NMRK1Q9NWW6 199 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ALKBH4Q9NXW9 302 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 GTSE1Q9NYZ3 720 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 MARCH4Q9P2E8 410 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 UBA2Q9UBT2 640 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 BCAP29Q9UHQ4 241 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 CORO1CQ9ULV4 474 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 PRPF19Q9UMS4 504 aaKnown RBP3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 LAMP3Q9UQV4 416 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMEM5Q9Y2B1 443 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF711Q9Y462 761 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 TRPM7Q96QT4 1865 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 THSD7BQ9C0I4 1608 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 NEMP2A6NFY4 417 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 C2orf81A6NN90 581 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 C16orf96A6NNT2 1141 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 CCL22O00626 93 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 UBE2CO00762 179 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SDHDO14521 159 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 PER2O15055 1255 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 UBDO15205 165 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 CFLARO15519 480 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 ADAM12O43184 909 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 COCHO43405 550 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 BUD23O43709 281 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 NDUFS3O75489 264 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZMPSTE24O75844 475 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SEC14L2O76054 403 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SRP72O76094 671 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 RHOBTB1O94844 696 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SUPT7LO94864 414 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SEC24AO95486 1093 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 IFNA2P01563 188 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC4A1P02730 911 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 NGFRP08138 427 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 FGF4P08620 206 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 CLTBP09497 229 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 PIRTP0C851 137 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 MBL2P11226 248 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 CD1DP15813 335 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 HMGA1P17096 107 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 MT3P25713 68 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 PSMA3P25788 255 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 CORO1AP31146 461 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 FMO4P31512 558 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 NNMTP40261 264 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 MTNR1AP48039 350 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 NUDT2P50583 147 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SUOXP51687 545 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 MTTPP55157 894 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDKN2DP55273 166 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 CCL23P55773 120 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 ATP6V0D1P61421 351 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 RPS24P62847 133 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 XIAPP98170 497 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 ROR2Q01974 943 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SULT2A1Q06520 285 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 RAD51Q06609 339 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 STX5Q13190 355 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 PLD1Q13393 1074 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 GAB1Q13480 694 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 ART3Q13508 389 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 GALNT3Q14435 633 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SQLEQ14534 574 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 PTPRCAPQ14761 206 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 VEPH1Q14D04 833 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 MED22Q15528 200 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 TYSND1Q2T9J0 566 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 UNC50Q53HI1 259 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF678Q5SXM1 525 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SPOUT1Q5T280 376 aaKnown RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 NCEH1Q6PIU2 408 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 AFTPHQ6ULP2 937 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 CYP20A1Q6UW02 462 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 PARM1Q6UWI2 310 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMEM207Q6UWW9 146 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 C18orf65Q6ZTR6 163 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 GLT6D1Q7Z4J2 308 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 DNAJB7Q7Z6W7 309 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 DEFB128Q7Z7B8 93 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 ISCA2Q86U28 154 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 SNX32Q86XE0 403 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 HPS6Q86YV9 775 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 APLFQ8IW19 511 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 MFN1Q8IWA4 741 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 RNF168Q8IYW5 571 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 DSELQ8IZU8 1212 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 PGAM4Q8N0Y7 254 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 RYBPQ8N488 228 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 CARNMT1Q8N4J0 409 aa3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 PAQR4Q8N4S7 273 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 ARL14EPQ8N8R7 260 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P11-201ENST00000440127 HJURPQ8NCD3 748 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms